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  5. AMTR_s00104p00071110

AMTR_s00104p00071110 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00104.22

Description : DCC family protein At1g52590, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0003269 (Archaeplastida) Phylogenetic Tree(s): OG0003269_tree ,
OG_05_0008958 (LandPlants) Phylogenetic Tree(s): OG_05_0008958_tree ,
OG_06_0010807 (SeedPlants) Phylogenetic Tree(s): OG_06_0010807_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00104p00071110
Cluster HCCA: Cluster_261

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000823.29 No alias DCC family protein At1g52590, chloroplastic... 0.01 Archaeplastida
LOC_Os01g07800.2 No alias DCC family protein At1g52590, chloroplastic... 0.02 Archaeplastida
Mp1g16330.1 No alias DCC family protein At1g52590, chloroplastic... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR007263 DUF393 67 176
No external refs found!