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Aliases : evm_27.TU.AmTr_v1.0_scaffold00104.35
Description : Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana
Gene families : OG0005558 (Archaeplastida) Phylogenetic Tree(s): OG0005558_tree ,
OG_05_0005809 (LandPlants) Phylogenetic Tree(s): OG_05_0005809_tree ,
OG_06_0005786 (SeedPlants) Phylogenetic Tree(s): OG_06_0005786_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00104p00092530 | |
| Cluster | HCCA: Cluster_248 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00001095.26 | No alias | Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum | 0.01 | Archaeplastida | |
| Cre08.g381516 | No alias | Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum | 0.03 | Archaeplastida | |
| MA_173903g0010 | No alias | Short-chain dehydrogenase TIC 32, chloroplastic... | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0008152 | metabolic process | IEA | Interproscan |
| MF | GO:0016491 | oxidoreductase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
| MF | GO:0004556 | alpha-amylase activity | IEP | Neighborhood |
| MF | GO:0004784 | superoxide dismutase activity | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| MF | GO:0005319 | lipid transporter activity | IEP | Neighborhood |
| MF | GO:0005342 | organic acid transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0005343 | organic acid:sodium symporter activity | IEP | Neighborhood |
| CC | GO:0005840 | ribosome | IEP | Neighborhood |
| BP | GO:0006412 | translation | IEP | Neighborhood |
| BP | GO:0006413 | translational initiation | IEP | Neighborhood |
| BP | GO:0006518 | peptide metabolic process | IEP | Neighborhood |
| BP | GO:0006801 | superoxide metabolic process | IEP | Neighborhood |
| BP | GO:0006814 | sodium ion transport | IEP | Neighborhood |
| MF | GO:0008028 | monocarboxylic acid transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008508 | bile acid:sodium symporter activity | IEP | Neighborhood |
| MF | GO:0008514 | organic anion transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0009975 | cyclase activity | IEP | Neighborhood |
| MF | GO:0009976 | tocopherol cyclase activity | IEP | Neighborhood |
| MF | GO:0015081 | sodium ion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015125 | bile acid transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015293 | symporter activity | IEP | Neighborhood |
| MF | GO:0015294 | solute:cation symporter activity | IEP | Neighborhood |
| MF | GO:0015355 | secondary active monocarboxylate transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015370 | solute:sodium symporter activity | IEP | Neighborhood |
| MF | GO:0016160 | amylase activity | IEP | Neighborhood |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Neighborhood |
| MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | Neighborhood |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
| MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | Neighborhood |
| MF | GO:0016841 | ammonia-lyase activity | IEP | Neighborhood |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Neighborhood |
| MF | GO:0016987 | sigma factor activity | IEP | Neighborhood |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Neighborhood |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Neighborhood |
| BP | GO:0043604 | amide biosynthetic process | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
| MF | GO:0046943 | carboxylic acid transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Neighborhood |
| MF | GO:0140161 | monocarboxylate:sodium symporter activity | IEP | Neighborhood |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
| MF | GO:1901618 | organic hydroxy compound transmembrane transporter activity | IEP | Neighborhood |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |