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  5. AMTR_s00106p00108310

AMTR_s00106p00108310 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00106.79

Description : Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component


Gene families : OG0000346 (Archaeplastida) Phylogenetic Tree(s): OG0000346_tree ,
OG_05_0002814 (LandPlants) Phylogenetic Tree(s): OG_05_0002814_tree ,
OG_06_0003173 (SeedPlants) Phylogenetic Tree(s): OG_06_0003173_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00106p00108310
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AT1G06430 FTSH8 FTSH protease 8 0.02 Archaeplastida
AT1G50250 FTSH1 FTSH protease 1 0.08 Archaeplastida
AT3G02450 No alias cell division protein ftsH, putative 0.07 Archaeplastida
AT3G16290 EMB2083 AAA-type ATPase family protein 0.03 Archaeplastida
AT5G42270 FTSH5, VAR1 FtsH extracellular protease family 0.07 Archaeplastida
Cre09.g393950 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.03 Archaeplastida
Cre12.g485800 No alias Protein degradation.peptidase families.metallopeptidase... 0.03 Archaeplastida
Cre17.g720050 No alias Protein degradation.peptidase families.metallopeptidase... 0.03 Archaeplastida
GSVIVT01008686001 No alias ATP-dependent zinc metalloprotease FTSH 1, chloroplastic... 0.03 Archaeplastida
GSVIVT01019239001 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.03 Archaeplastida
GSVIVT01020760001 No alias Protein degradation.peptidase families.metallopeptidase... 0.08 Archaeplastida
GSVIVT01036484001 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.08 Archaeplastida
Gb_06887 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.03 Archaeplastida
Gb_12830 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.04 Archaeplastida
Gb_20809 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_32360 No alias component FtsHi of protein translocation ATPase motor complex 0.02 Archaeplastida
LOC_Os06g45820.1 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.05 Archaeplastida
LOC_Os06g51029.1 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.04 Archaeplastida
MA_188257g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
MA_98203g0010 No alias No annotation 0.08 Archaeplastida
Mp3g08790.1 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.06 Archaeplastida
Mp4g19200.1 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.06 Archaeplastida
Pp3c12_22830V3.1 No alias FtsH extracellular protease family 0.06 Archaeplastida
Pp3c17_20370V3.1 No alias AAA-type ATPase family protein 0.03 Archaeplastida
Pp3c20_15780V3.1 No alias FtsH extracellular protease family 0.04 Archaeplastida
Pp3c20_5760V3.1 No alias FtsH extracellular protease family 0.04 Archaeplastida
Pp3c22_8480V3.1 No alias FtsH extracellular protease family 0.04 Archaeplastida
Pp3c23_14665V3.1 No alias FtsH extracellular protease family 0.08 Archaeplastida
Pp3c23_8400V3.1 No alias FtsH extracellular protease family 0.06 Archaeplastida
Pp3c4_20860V3.1 No alias cell division protein ftsH, putative 0.03 Archaeplastida
Smo139726 No alias Protein degradation.peptidase families.metallopeptidase... 0.03 Archaeplastida
Smo149856 No alias Protein degradation.peptidase families.metallopeptidase... 0.02 Archaeplastida
Smo152929 No alias Protein degradation.peptidase families.metallopeptidase... 0.06 Archaeplastida
Smo166773 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.02 Archaeplastida
Solyc03g046340.3.1 No alias component FtsHi of protein translocation ATPase motor complex 0.03 Archaeplastida
Solyc04g082250.3.1 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.06 Archaeplastida
Solyc07g055320.4.1 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.05 Archaeplastida
Solyc08g082530.4.1 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.02 Archaeplastida
Zm00001e007868_P001 No alias component FtsHi of protein translocation ATPase motor complex 0.06 Archaeplastida
Zm00001e030153_P001 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.06 Archaeplastida
Zm00001e030358_P003 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.06 Archaeplastida
Zm00001e037753_P001 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
MF GO:0004618 phosphoglycerate kinase activity IEP Neighborhood
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006090 pyruvate metabolic process IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0006772 thiamine metabolic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0006787 porphyrin-containing compound catabolic process IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009228 thiamine biosynthetic process IEP Neighborhood
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015996 chlorophyll catabolic process IEP Neighborhood
BP GO:0016108 tetraterpenoid metabolic process IEP Neighborhood
BP GO:0016109 tetraterpenoid biosynthetic process IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
BP GO:0016116 carotenoid metabolic process IEP Neighborhood
BP GO:0016117 carotenoid biosynthetic process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Neighborhood
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0019203 carbohydrate phosphatase activity IEP Neighborhood
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033015 tetrapyrrole catabolic process IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
MF GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
BP GO:0042723 thiamine-containing compound metabolic process IEP Neighborhood
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
BP GO:0046149 pigment catabolic process IEP Neighborhood
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
MF GO:0047746 chlorophyllase activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050308 sugar-phosphatase activity IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051187 cofactor catabolic process IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood
BP GO:0051205 protein insertion into membrane IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 262 393
IPR011546 Pept_M41_FtsH_extracell 82 157
IPR000642 Peptidase_M41 456 665
No external refs found!