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  5. AMTR_s00109p00022120

AMTR_s00109p00022120 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00109.6

No description available


Gene families : OG0005737 (Archaeplastida) Phylogenetic Tree(s): OG0005737_tree ,
OG_05_0003883 (LandPlants) Phylogenetic Tree(s): OG_05_0003883_tree ,
OG_06_0002256 (SeedPlants) Phylogenetic Tree(s): OG_06_0002256_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00109p00022120
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AT1G06923 No alias BEST Arabidopsis thaliana protein match is: ovate family... 0.03 Archaeplastida
AT1G15260 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 Archaeplastida
AT2G30395 ATOFP17, OFP17 ovate family protein 17 0.03 Archaeplastida
GSVIVT01024580001 No alias Transcription repressor OFP17 OS=Arabidopsis thaliana 0.02 Archaeplastida
LOC_Os05g26210.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g48140.1 No alias Transcription repressor OFP17 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_112360g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9013514g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g082450.1.1 No alias Transcription repressor OFP17 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
MF GO:0000156 phosphorelay response regulator activity IEP Neighborhood
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!