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  5. AMTR_s00109p00024120

AMTR_s00109p00024120 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00109.7

Description : RNA biosynthesis.transcriptional activation.OFP transcription factor


Gene families : OG0000130 (Archaeplastida) Phylogenetic Tree(s): OG0000130_tree ,
OG_05_0000050 (LandPlants) Phylogenetic Tree(s): OG_05_0000050_tree ,
OG_06_0000120 (SeedPlants) Phylogenetic Tree(s): OG_06_0000120_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00109p00024120

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01034649001 No alias RNA biosynthesis.transcriptional activation.OFP... 0.05 Archaeplastida
Zm00001e000779_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e016408_P001 No alias transcription factor (OFP) 0.01 Archaeplastida
Zm00001e019432_P001 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e031752_P001 No alias transcription factor (OFP) 0.02 Archaeplastida
Zm00001e031917_P001 No alias transcription factor (OFP) 0.02 Archaeplastida
Zm00001e032149_P001 No alias transcription factor (OFP) 0.03 Archaeplastida
Zm00001e039401_P001 No alias transcription factor (OFP) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004871 obsolete signal transducer activity IEP Neighborhood
CC GO:0005834 heterotrimeric G-protein complex IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
CC GO:1905360 GTPase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR006458 Ovate_C 226 284
No external refs found!