1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00109p00036750

AMTR_s00109p00036750 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00109.25

Description : Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll b reductase complex.NYC1 component


Gene families : OG0001994 (Archaeplastida) Phylogenetic Tree(s): OG0001994_tree ,
OG_05_0002236 (LandPlants) Phylogenetic Tree(s): OG_05_0002236_tree ,
OG_06_0009598 (SeedPlants) Phylogenetic Tree(s): OG_06_0009598_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00109p00036750
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AT4G13250 NYC1 NAD(P)-binding Rossmann-fold superfamily protein 0.02 Archaeplastida
MA_277759g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Smo128787 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.02 Archaeplastida
Zm00001e012374_P001 No alias component NOL of chlorophyll b reductase complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0008152 metabolic process IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003913 DNA photolyase activity IEP Neighborhood
MF GO:0004659 prenyltransferase activity IEP Neighborhood
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!