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  5. AMTR_s00109p00086600

AMTR_s00109p00086600 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00109.70

Description : RNA biosynthesis.transcriptional activation.CPP1-like transcription factor


Gene families : OG0000498 (Archaeplastida) Phylogenetic Tree(s): OG0000498_tree ,
OG_05_0003860 (LandPlants) Phylogenetic Tree(s): OG_05_0003860_tree ,
OG_06_0004569 (SeedPlants) Phylogenetic Tree(s): OG_06_0004569_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00109p00086600
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
AT3G04850 No alias Tesmin/TSO1-like CXC domain-containing protein 0.03 Archaeplastida
LOC_Os07g07974.1 No alias CPP1-like transcription factor 0.02 Archaeplastida
LOC_Os08g28214.1 No alias CPP1-like transcription factor 0.03 Archaeplastida
Zm00001e029008_P001 No alias CPP1-like transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006771 riboflavin metabolic process IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
MF GO:0008531 riboflavin kinase activity IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009231 riboflavin biosynthetic process IEP Neighborhood
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
MF GO:0016972 thiol oxidase activity IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042726 flavin-containing compound metabolic process IEP Neighborhood
BP GO:0042727 flavin-containing compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005172 CRC 156 195
IPR005172 CRC 72 111
No external refs found!