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  5. AMTR_s00110p00030150

AMTR_s00110p00030150 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00110.8

Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0000092 (Archaeplastida) Phylogenetic Tree(s): OG0000092_tree ,
OG_05_0000040 (LandPlants) Phylogenetic Tree(s): OG_05_0000040_tree ,
OG_06_0016858 (SeedPlants) Phylogenetic Tree(s): OG_06_0016858_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00110p00030150
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01020814001 No alias External stimuli response.light.red/far red light.PIF... 0.03 Archaeplastida
LOC_Os12g41650.2 No alias transcription factor (bHLH). PIF red/far-red light... 0.04 Archaeplastida
Mp3g17350.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e005046_P003 No alias transcription factor (bHLH). PIF red/far-red light... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
MF GO:0016851 magnesium chelatase activity IEP Neighborhood
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Neighborhood
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 244 291
No external refs found!