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  5. AMTR_s00110p00143620

AMTR_s00110p00143620 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00110.120

Description : PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana


Gene families : OG0000145 (Archaeplastida) Phylogenetic Tree(s): OG0000145_tree ,
OG_05_0000072 (LandPlants) Phylogenetic Tree(s): OG_05_0000072_tree ,
OG_06_0000086 (SeedPlants) Phylogenetic Tree(s): OG_06_0000086_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00110p00143620
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AT1G66855 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 Archaeplastida
AT1G66870 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 Archaeplastida
AT4G09462 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 Archaeplastida
AT4G09464 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 Archaeplastida
AT4G09465 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 Archaeplastida
AT4G09466 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 Archaeplastida
AT4G09467 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 Archaeplastida
AT4G13600 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 Archaeplastida
AT5G35740 No alias Carbohydrate-binding X8 domain superfamily protein 0.04 Archaeplastida
AT5G63230 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 Archaeplastida
AT5G63240 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 Archaeplastida
AT5G63250 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 Archaeplastida
GSVIVT01014068001 No alias Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea 0.04 Archaeplastida
GSVIVT01015894001 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01021386001 No alias Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01030060001 No alias Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01031317001 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_00481 No alias Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os01g14140.1 No alias Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea... 0.03 Archaeplastida
LOC_Os03g61780.1 No alias Major pollen allergen Ole e 10 OS=Olea europaea... 0.05 Archaeplastida
LOC_Os06g45450.1 No alias Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... 0.07 Archaeplastida
LOC_Os07g40940.1 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.02 Archaeplastida
MA_8718849g0010 No alias Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis... 0.03 Archaeplastida
Solyc09g091920.3.1 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.02 Archaeplastida
Solyc12g017360.3.1 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.05 Archaeplastida
Solyc12g098410.2.1 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e002008_P001 No alias Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e020392_P001 No alias Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e021782_P001 No alias Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea... 0.02 Archaeplastida
Zm00001e027936_P001 No alias Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e032121_P001 No alias Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR012946 X8 7 77
No external refs found!