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  5. AMTR_s00111p00051610

AMTR_s00111p00051610 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00111.25

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.DREB-type transcription factor


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000070 (SeedPlants) Phylogenetic Tree(s): OG_06_0000070_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00111p00051610
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00180260 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00049p00214620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00099p00029210 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00099p00039760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AT1G68550 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT3G20310 ERF7, ATERF7, ATERF-7 ethylene response factor 7 0.04 Archaeplastida
AT4G25480 DREB1A, ATCBF3, CBF3 dehydration response element B1A 0.04 Archaeplastida
GSVIVT01035911001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Gb_02790 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_11856 No alias Ethylene-responsive transcription factor RAP2-3... 0.07 Archaeplastida
Gb_23870 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os01g12440.1 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os02g43940.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os02g43970.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os03g08490.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g09790.1 No alias Ethylene-responsive transcription factor ERF018... 0.08 Archaeplastida
LOC_Os06g10780.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os06g47590.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g12510.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os10g41330.1 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_18081g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_5805979g0010 No alias Ethylene-responsive transcription factor 1A... 0.04 Archaeplastida
MA_912855g0010 No alias transcription factor (ERF) 0.06 Archaeplastida
Solyc02g093130.3.1 No alias transcription factor (DREB) 0.06 Archaeplastida
Solyc08g066660.1.1 No alias transcription factor (DREB) 0.04 Archaeplastida
Zm00001e007332_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e015429_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e016421_P001 No alias transcription factor (ERF) 0.05 Archaeplastida
Zm00001e023157_P001 No alias transcription factor (DREB) 0.06 Archaeplastida
Zm00001e025999_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e040124_P001 No alias no hits & (original description: none) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0047134 protein-disulfide reductase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 82 132
No external refs found!