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  5. AMTR_s00113p00026730

AMTR_s00113p00026730 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00113.6

No description available


Gene families : OG0008348 (Archaeplastida) Phylogenetic Tree(s): OG0008348_tree ,
OG_05_0007314 (LandPlants) Phylogenetic Tree(s): OG_05_0007314_tree ,
OG_06_0004316 (SeedPlants) Phylogenetic Tree(s): OG_06_0004316_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00113p00026730
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
AT1G64700 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.06 Archaeplastida
GSVIVT01019671001 No alias No description available 0.03 Archaeplastida
GSVIVT01027432001 No alias No description available 0.04 Archaeplastida
Gb_39026 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_16509g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_6869016g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc10g005020.3.1 No alias no hits & (original description: none) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR025322 DUF4228_plant 1 173
No external refs found!