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  5. AT1G60390

AT1G60390 (PG1)


Aliases : PG1

Description : polygalacturonase 1


Gene families : OG0000327 (Archaeplastida) Phylogenetic Tree(s): OG0000327_tree ,
OG_05_0000147 (LandPlants) Phylogenetic Tree(s): OG_05_0000147_tree ,
OG_06_0001066 (SeedPlants) Phylogenetic Tree(s): OG_06_0001066_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G60390
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00173800 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and... 0.03 Archaeplastida
AT1G23760 JP630, PG3 BURP domain-containing protein 0.03 Archaeplastida
AT1G49320 USPL1, ATUSPL1 unknown seed protein like 1 0.04 Archaeplastida
AT1G70370 PG2 polygalacturonase 2 0.05 Archaeplastida
GSVIVT01007771001 No alias Cell wall.pectin.modification and... 0.04 Archaeplastida
GSVIVT01035686001 No alias BURP domain protein RD22 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_18274 No alias non-catalytic polygalacturonase regulator 0.03 Archaeplastida
LOC_Os06g19740.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g29200.1 No alias non-catalytic polygalacturonase regulator 0.04 Archaeplastida
LOC_Os08g38810.1 No alias BURP domain-containing protein 13 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os09g16010.1 No alias non-catalytic polygalacturonase regulator 0.03 Archaeplastida
MA_19057g0010 No alias non-catalytic polygalacturonase regulator 0.03 Archaeplastida
MA_462957g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_577011g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_5913418g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_608446g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_63321g0010 No alias BURP domain protein RD22 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_8888577g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c4_21630V3.1 No alias polygalacturonase 1 0.03 Archaeplastida
Solyc02g062310.1.1 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Solyc08g068130.1.1 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e003438_P003 No alias Protein RAFTIN 1A OS=Triticum aestivum... 0.03 Archaeplastida
Zm00001e019897_P001 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Zm00001e022326_P001 No alias non-catalytic polygalacturonase regulator 0.03 Archaeplastida
Zm00001e029096_P002 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
BP GO:0003002 regionalization IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0005986 sucrose biosynthetic process IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006949 syncytium formation IEP Neighborhood
BP GO:0007049 cell cycle IEP Neighborhood
BP GO:0007166 cell surface receptor signaling pathway IEP Neighborhood
BP GO:0007167 enzyme linked receptor protein signaling pathway IEP Neighborhood
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009820 alkaloid metabolic process IEP Neighborhood
BP GO:0009821 alkaloid biosynthetic process IEP Neighborhood
BP GO:0010014 meristem initiation IEP Neighborhood
BP GO:0010026 trichome differentiation IEP Neighborhood
BP GO:0010075 regulation of meristem growth IEP Neighborhood
BP GO:0010091 trichome branching IEP Neighborhood
BP GO:0010222 stem vascular tissue pattern formation IEP Neighborhood
BP GO:0010232 vascular transport IEP Neighborhood
BP GO:0010233 phloem transport IEP Neighborhood
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0016926 protein desumoylation IEP Neighborhood
BP GO:0019852 L-ascorbic acid metabolic process IEP Neighborhood
BP GO:0019853 L-ascorbic acid biosynthetic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033037 polysaccharide localization IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0048509 regulation of meristem development IEP Neighborhood
BP GO:0048638 regulation of developmental growth IEP Neighborhood
MF GO:0050105 L-gulonolactone oxidase activity IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0052545 callose localization IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0080165 callose deposition in phloem sieve plate IEP Neighborhood
InterPro domains Description Start Stop
IPR004873 BURP_dom 409 621
No external refs found!