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  5. AT1G60400

AT1G60400


Description : F-box/RNI-like superfamily protein


Gene families : OG0001957 (Archaeplastida) Phylogenetic Tree(s): OG0001957_tree ,
OG_05_0001277 (LandPlants) Phylogenetic Tree(s): OG_05_0001277_tree ,
OG_06_0000660 (SeedPlants) Phylogenetic Tree(s): OG_06_0000660_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G60400
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AT1G16940 No alias F-box/RNI-like/FBD-like domains-containing protein 0.07 Archaeplastida
AT1G60410 No alias F-box family protein 0.04 Archaeplastida
AT1G66290 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida
AT1G66640 No alias RNI-like superfamily protein 0.03 Archaeplastida
AT1G69630 No alias F-box/RNI-like superfamily protein 0.02 Archaeplastida
AT1G78750 No alias F-box/RNI-like superfamily protein 0.07 Archaeplastida
AT1G80470 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 Archaeplastida
AT5G22600 No alias FBD / Leucine Rich Repeat domains containing protein 0.02 Archaeplastida
AT5G22670 No alias F-box/RNI-like/FBD-like domains-containing protein 0.06 Archaeplastida
AT5G22680 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.03 Archaeplastida
AT5G22720 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT5G25850 No alias F-box/RNI-like/FBD-like domains-containing protein 0.08 Archaeplastida
AT5G44940 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT5G44950 No alias F-box/RNI-like/FBD-like domains-containing protein 0.08 Archaeplastida
AT5G44960 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 Archaeplastida
AT5G44970 No alias Protein with RNI-like/FBD-like domains 0.06 Archaeplastida
AT5G44980 No alias F-box/RNI-like/FBD-like domains-containing protein 0.07 Archaeplastida
AT5G53635 No alias F-box/RNI-like/FBD-like domains-containing protein 0.06 Archaeplastida
AT5G53637 No alias No description available 0.03 Archaeplastida
AT5G53640 No alias CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like... 0.02 Archaeplastida
AT5G53840 No alias F-box/RNI-like/FBD-like domains-containing protein 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003886 DNA (cytosine-5-)-methyltransferase activity IEP Neighborhood
MF GO:0004150 dihydroneopterin aldolase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0009008 DNA-methyltransferase activity IEP Neighborhood
BP GO:0009410 response to xenobiotic stimulus IEP Neighborhood
MF GO:0009824 AMP dimethylallyltransferase activity IEP Neighborhood
MF GO:0015386 potassium:proton antiporter activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0022821 potassium ion antiporter activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0052622 ATP dimethylallyltransferase activity IEP Neighborhood
MF GO:0052623 ADP dimethylallyltransferase activity IEP Neighborhood
BP GO:0060688 regulation of morphogenesis of a branching structure IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1900618 regulation of shoot system morphogenesis IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1905428 regulation of plant organ formation IEP Neighborhood
BP GO:2000032 regulation of secondary shoot formation IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 16 52
IPR013101 Leu-rich_rpt_2 166 189
No external refs found!