1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00116p00138190

AMTR_s00116p00138190 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00116.40

No description available


Gene families : OG0006462 (Archaeplastida) Phylogenetic Tree(s): OG0006462_tree ,
OG_05_0004446 (LandPlants) Phylogenetic Tree(s): OG_05_0004446_tree ,
OG_06_0003080 (SeedPlants) Phylogenetic Tree(s): OG_06_0003080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00116p00138190
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00268430 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00045p00159230 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00049p00178220 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00049p00183070 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 70 101
No external refs found!