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  5. AMTR_s00122p00085720

AMTR_s00122p00085720 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00122.33

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter


Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0000049 (LandPlants) Phylogenetic Tree(s): OG_05_0000049_tree ,
OG_06_0000052 (SeedPlants) Phylogenetic Tree(s): OG_06_0000052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00122p00085720
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AT1G59870 PEN3, ABCG36,... ABC-2 and Plant PDR ABC-type transporter family protein 0.02 Archaeplastida
AT1G66950 PDR11, ATPDR11 pleiotropic drug resistance 11 0.03 Archaeplastida
AT2G26910 PDR4, ATPDR4 pleiotropic drug resistance 4 0.09 Archaeplastida
Cpa|evm.model.tig00020537.52 No alias ABC transporter G family member 17 OS=Arabidopsis thaliana 0.01 Archaeplastida
Cpa|evm.model.tig00020892.22 No alias ABC transporter G family member 51 OS=Oryza sativa... 0.01 Archaeplastida
Cre04.g224500 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
Cre09.g395750 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
Cre16.g655450 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
GSVIVT01016993001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01016998001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01034745001 No alias Solute transport.primary active transport.ABC... 0.07 Archaeplastida
GSVIVT01035715001 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
GSVIVT01035784001 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Gb_15493 No alias subfamily ABCG transporter 0.02 Archaeplastida
Gb_34645 No alias subfamily ABCG transporter 0.05 Archaeplastida
LOC_Os01g08260.1 No alias subfamily ABCG transporter 0.06 Archaeplastida
LOC_Os01g42380.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
LOC_Os01g42410.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
LOC_Os02g32690.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
LOC_Os07g33780.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
LOC_Os11g37700.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
MA_10426781g0010 No alias subfamily ABCG transporter 0.03 Archaeplastida
Mp2g07030.1 No alias subfamily ABCG transporter 0.05 Archaeplastida
Solyc05g018510.3.1 No alias cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.03 Archaeplastida
Solyc05g053610.2.1 No alias subfamily ABCG transporter 0.05 Archaeplastida
Solyc05g055330.3.1 No alias subfamily ABCG transporter 0.07 Archaeplastida
Solyc06g065670.4.1 No alias cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.07 Archaeplastida
Solyc06g076930.2.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Solyc09g091670.3.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Solyc11g007300.2.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e024257_P001 No alias subfamily ABCG transporter 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
BP GO:0043086 negative regulation of catalytic activity IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044092 negative regulation of molecular function IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 184 341
IPR003439 ABC_transporter-like 876 1004
IPR013525 ABC_2_trans 496 707
IPR013525 ABC_2_trans 1150 1363
IPR013581 PDR_assoc 712 777
No external refs found!