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  5. AMTR_s00128p00093480

AMTR_s00128p00093480 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00128.23

No description available


Gene families : OG0002399 (Archaeplastida) Phylogenetic Tree(s): OG0002399_tree ,
OG_05_0001592 (LandPlants) Phylogenetic Tree(s): OG_05_0001592_tree ,
OG_06_0000938 (SeedPlants) Phylogenetic Tree(s): OG_06_0000938_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00128p00093480
Cluster HCCA: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
AT2G26530 AR781 Protein of unknown function (DUF1645) 0.09 Archaeplastida
GSVIVT01031783001 No alias No description available 0.06 Archaeplastida
Gb_34249 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_34250 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os03g19090.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_31993g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_6242441g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
MA_80261g0010 No alias no hits & (original description: none) 0.11 Archaeplastida
MA_8431674g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8976739g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc01g108440.2.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc03g112700.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc04g079350.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e002860_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e010793_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e035566_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006417 regulation of translation IEP Neighborhood
BP GO:0006448 regulation of translational elongation IEP Neighborhood
BP GO:0006449 regulation of translational termination IEP Neighborhood
BP GO:0006452 translational frameshifting IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009891 positive regulation of biosynthetic process IEP Neighborhood
BP GO:0009893 positive regulation of metabolic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0010628 positive regulation of gene expression IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
CC GO:0031012 extracellular matrix IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031325 positive regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Neighborhood
MF GO:0043021 ribonucleoprotein complex binding IEP Neighborhood
MF GO:0043022 ribosome binding IEP Neighborhood
BP GO:0043243 positive regulation of protein complex disassembly IEP Neighborhood
BP GO:0043244 regulation of protein complex disassembly IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0045727 positive regulation of translation IEP Neighborhood
BP GO:0045901 positive regulation of translational elongation IEP Neighborhood
BP GO:0045905 positive regulation of translational termination IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051130 positive regulation of cellular component organization IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051247 positive regulation of protein metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR012442 DUF1645_plant 130 351
No external refs found!