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  5. AMTR_s00129p00078620

AMTR_s00129p00078620 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00129.50

Description : 3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana


Gene families : OG0012113 (Archaeplastida) Phylogenetic Tree(s): OG0012113_tree ,
OG_05_0012011 (LandPlants) Phylogenetic Tree(s): OG_05_0012011_tree ,
OG_06_0012065 (SeedPlants) Phylogenetic Tree(s): OG_06_0012065_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00129p00078620
Cluster HCCA: Cluster_284

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00105p00128000 evm_27.TU.AmTr_v1... 3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00129p00101490 evm_27.TU.AmTr_v1... Lipid metabolism.fatty acid synthesis.fatty acid... 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR013601 FAE1_typ3_polyketide_synth 4 110
No external refs found!