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  5. AMTR_s00130p00109580

AMTR_s00130p00109580 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00130.52

No description available


Gene families : OG0002412 (Archaeplastida) Phylogenetic Tree(s): OG0002412_tree ,
OG_05_0001599 (LandPlants) Phylogenetic Tree(s): OG_05_0001599_tree ,
OG_06_0000865 (SeedPlants) Phylogenetic Tree(s): OG_06_0000865_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00130p00109580
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00209470 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00022p00083220 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00031p00084800 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00053p00200540 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00093p00078990 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00102p00021700 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s01449p00007930 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!