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  5. AMTR_s00131p00043500

AMTR_s00131p00043500 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00131.26

Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase guanyl-nucleotide exchange factor (ARF-GEF) activities.BIG-type ARF-GEF factor


Gene families : OG0001057 (Archaeplastida) Phylogenetic Tree(s): OG0001057_tree ,
OG_05_0005925 (LandPlants) Phylogenetic Tree(s): OG_05_0005925_tree ,
OG_06_0007536 (SeedPlants) Phylogenetic Tree(s): OG_06_0007536_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00131p00043500
Cluster HCCA: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
AT1G01960 EDA10 SEC7-like guanine nucleotide exchange family protein 0.06 Archaeplastida
AT3G43300 ATMIN7, BEN1 HOPM interactor 7 0.06 Archaeplastida
AT3G60860 No alias SEC7-like guanine nucleotide exchange family protein 0.03 Archaeplastida
AT4G38200 No alias SEC7-like guanine nucleotide exchange family protein 0.04 Archaeplastida
Cre09.g390319 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
GSVIVT01014993001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 Archaeplastida
GSVIVT01023854001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 Archaeplastida
LOC_Os06g41780.2 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.05 Archaeplastida
MA_20138g0010 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.03 Archaeplastida
MA_20563g0010 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.03 Archaeplastida
Mp7g11590.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.02 Archaeplastida
Pp3c11_12270V3.1 No alias SEC7-like guanine nucleotide exchange family protein 0.02 Archaeplastida
Smo173646 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 Archaeplastida
Solyc01g112350.3.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.04 Archaeplastida
Solyc12g017830.3.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.02 Archaeplastida
Zm00001e025045_P001 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.06 Archaeplastida
Zm00001e035267_P004 No alias No annotation 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEA Interproscan
BP GO:0032012 regulation of ARF protein signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003942 N-acetyl-gamma-glutamyl-phosphate reductase activity IEP Neighborhood
MF GO:0004221 obsolete ubiquitin thiolesterase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR015403 Sec7_C 1206 1291
IPR000904 Sec7_dom 710 894
No external refs found!