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  5. AMTR_s00131p00109910

AMTR_s00131p00109910 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00131.79

Description : Cytoskeleton.microfilament network.actin filament protein


Gene families : OG0000334 (Archaeplastida) Phylogenetic Tree(s): OG0000334_tree ,
OG_05_0000214 (LandPlants) Phylogenetic Tree(s): OG_05_0000214_tree ,
OG_06_0000153 (SeedPlants) Phylogenetic Tree(s): OG_06_0000153_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00131p00109910
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AT3G12110 ACT11 actin-11 0.03 Archaeplastida
GSVIVT01003099001 No alias Actin-1 OS=Oryza sativa subsp. indica 0.02 Archaeplastida
Gb_08812 No alias actin filament protein 0.02 Archaeplastida
LOC_Os03g61970.1 No alias actin filament protein 0.02 Archaeplastida
MA_96086g0010 No alias actin filament protein 0.02 Archaeplastida
Mp6g10990.1 No alias actin filament protein 0.02 Archaeplastida
Mp6g11010.1 No alias actin filament protein 0.02 Archaeplastida
Smo230187 No alias Cytoskeleton.microfilament network.actin filament protein 0.03 Archaeplastida
Solyc10g080500.2.1 No alias actin filament protein 0.03 Archaeplastida
Solyc10g086460.2.1 No alias actin filament protein 0.03 Archaeplastida
Solyc11g005330.2.1 No alias actin filament protein 0.06 Archaeplastida
Zm00001e019171_P001 No alias actin filament protein 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
InterPro domains Description Start Stop
IPR004000 Actin 5 377
No external refs found!