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Aliases : evm_27.TU.AmTr_v1.0_scaffold00137.53
Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor
Gene families : OG0000103 (Archaeplastida) Phylogenetic Tree(s): OG0000103_tree ,
OG_05_0000039 (LandPlants) Phylogenetic Tree(s): OG_05_0000039_tree ,
OG_06_0000107 (SeedPlants) Phylogenetic Tree(s): OG_06_0000107_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00137p00104280 | |
| Cluster | HCCA: Cluster_183 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G27730 | ZAT10, STZ | salt tolerance zinc finger | 0.09 | Archaeplastida | |
| AT2G28200 | No alias | C2H2-type zinc finger family protein | 0.03 | Archaeplastida | |
| AT2G37430 | No alias | C2H2 and C2HC zinc fingers superfamily protein | 0.05 | Archaeplastida | |
| AT3G19580 | AZF2, ZF2 | zinc-finger protein 2 | 0.06 | Archaeplastida | |
| AT3G46080 | No alias | C2H2-type zinc finger family protein | 0.1 | Archaeplastida | |
| AT3G46090 | ZAT7 | C2H2 and C2HC zinc fingers superfamily protein | 0.05 | Archaeplastida | |
| AT5G04340 | CZF2, ZAT6, C2H2 | zinc finger of Arabidopsis thaliana 6 | 0.11 | Archaeplastida | |
| AT5G43170 | AZF3, ZF3 | zinc-finger protein 3 | 0.03 | Archaeplastida | |
| AT5G59820 | RHL41, ZAT12 | C2H2-type zinc finger family protein | 0.04 | Archaeplastida | |
| AT5G61470 | No alias | C2H2-like zinc finger protein | 0.03 | Archaeplastida | |
| AT5G67450 | AZF1, ZF1 | zinc-finger protein 1 | 0.04 | Archaeplastida | |
| GSVIVT01037851001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.05 | Archaeplastida | |
| Gb_10419 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
| Gb_16414 | No alias | C2H2 zinc finger transcription factor | 0.05 | Archaeplastida | |
| Gb_16419 | No alias | C2H2 zinc finger transcription factor | 0.04 | Archaeplastida | |
| LOC_Os01g62130.1 | No alias | C2H2 zinc finger transcription factor | 0.02 | Archaeplastida | |
| LOC_Os03g32220.1 | No alias | C2H2 zinc finger transcription factor | 0.07 | Archaeplastida | |
| LOC_Os03g41390.1 | No alias | C2H2 zinc finger transcription factor | 0.04 | Archaeplastida | |
| LOC_Os03g55540.1 | No alias | C2H2 zinc finger transcription factor | 0.08 | Archaeplastida | |
| LOC_Os03g60540.1 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
| LOC_Os03g60560.1 | No alias | C2H2 zinc finger transcription factor | 0.05 | Archaeplastida | |
| LOC_Os03g60570.1 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
| LOC_Os04g08060.1 | No alias | C2H2 zinc finger transcription factor | 0.02 | Archaeplastida | |
| LOC_Os12g39400.1 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
| MA_109421g0010 | No alias | C2H2 zinc finger transcription factor | 0.09 | Archaeplastida | |
| MA_167434g0010 | No alias | C2H2 zinc finger transcription factor | 0.02 | Archaeplastida | |
| MA_19127g0010 | No alias | C2H2 zinc finger transcription factor | 0.08 | Archaeplastida | |
| MA_23050g0010 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
| MA_6321456g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_858691g0010 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
| Pp3c21_440V3.1 | No alias | C2H2-like zinc finger protein | 0.03 | Archaeplastida | |
| Solyc01g107170.2.1 | No alias | C2H2 zinc finger transcription factor | 0.07 | Archaeplastida | |
| Solyc04g077980.1.1 | No alias | C2H2 zinc finger transcription factor | 0.08 | Archaeplastida | |
| Solyc05g054650.1.1 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
| Solyc09g008440.1.1 | No alias | C2H2 zinc finger transcription factor | 0.05 | Archaeplastida | |
| Zm00001e001253_P001 | No alias | C2H2 zinc finger transcription factor | 0.06 | Archaeplastida | |
| Zm00001e002063_P001 | No alias | C2H2 zinc finger transcription factor | 0.07 | Archaeplastida | |
| Zm00001e003057_P001 | No alias | C2H2 zinc finger transcription factor | 0.06 | Archaeplastida | |
| Zm00001e003413_P001 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Zm00001e005777_P001 | No alias | C2H2 zinc finger transcription factor | 0.09 | Archaeplastida | |
| Zm00001e006181_P001 | No alias | C2H2 zinc finger transcription factor | 0.07 | Archaeplastida | |
| Zm00001e006183_P001 | No alias | C2H2 zinc finger transcription factor | 0.02 | Archaeplastida | |
| Zm00001e006184_P001 | No alias | C2H2 zinc finger transcription factor | 0.07 | Archaeplastida | |
| Zm00001e011755_P001 | No alias | C2H2 zinc finger transcription factor | 0.02 | Archaeplastida | |
| Zm00001e011756_P001 | No alias | C2H2 zinc finger transcription factor | 0.07 | Archaeplastida | |
| Zm00001e011983_P001 | No alias | C2H2 zinc finger transcription factor | 0.09 | Archaeplastida | |
| Zm00001e019349_P001 | No alias | C2H2 zinc finger transcription factor | 0.04 | Archaeplastida | |
| Zm00001e019350_P001 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
| Zm00001e028782_P001 | No alias | C2H2 zinc finger transcription factor | 0.07 | Archaeplastida | |
| Zm00001e029605_P001 | No alias | C2H2 zinc finger transcription factor | 0.04 | Archaeplastida | |
| Zm00001e035423_P001 | No alias | C2H2 zinc finger transcription factor | 0.02 | Archaeplastida | |
| Zm00001e038054_P001 | No alias | C2H2 zinc finger transcription factor | 0.02 | Archaeplastida | |
| Zm00001e038072_P001 | No alias | C2H2 zinc finger transcription factor | 0.07 | Archaeplastida | |
| Zm00001e038074_P001 | No alias | C2H2 zinc finger transcription factor | 0.08 | Archaeplastida | |
| Zm00001e038464_P001 | No alias | C2H2 zinc finger transcription factor | 0.05 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000151 | ubiquitin ligase complex | IEP | Neighborhood |
| BP | GO:0000272 | polysaccharide catabolic process | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Neighborhood |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
| BP | GO:0005984 | disaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0005991 | trehalose metabolic process | IEP | Neighborhood |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | Neighborhood |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Neighborhood |
| MF | GO:0016160 | amylase activity | IEP | Neighborhood |
| MF | GO:0016161 | beta-amylase activity | IEP | Neighborhood |
| BP | GO:0016567 | protein ubiquitination | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Neighborhood |
| CC | GO:0031012 | extracellular matrix | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | Neighborhood |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Neighborhood |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Neighborhood |
| CC | GO:0044421 | extracellular region part | IEP | Neighborhood |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| CC | GO:1902494 | catalytic complex | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| CC | GO:1990234 | transferase complex | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |