AMTR_s00138p00111880 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00138.56

No description available


Gene families : OG0008539 (Archaeplastida) Phylogenetic Tree(s): OG0008539_tree ,
OG_05_0008817 (LandPlants) Phylogenetic Tree(s): OG_05_0008817_tree ,
OG_06_0011534 (SeedPlants) Phylogenetic Tree(s): OG_06_0011534_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00138p00111880
Cluster HCCA:
  • Cluster_120

  • Target Alias Description ECC score Gene Family Method Actions
    LOC_Os12g29670.1 No alias no hits & (original description: none) 0.04 Archaeplastida
    Zm00001e034677_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

    Type GO Term Name Evidence Source

    No GO annotation available for this sequence

    Type GO Term Name Evidence Source
    MF GO:0003676 nucleic acid binding IEP Neighborhood
    MF GO:0003723 RNA binding IEP Neighborhood
    MF GO:0003743 translation initiation factor activity IEP Neighborhood
    MF GO:0003746 translation elongation factor activity IEP Neighborhood
    MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
    MF GO:0004871 obsolete signal transducer activity IEP Neighborhood
    MF GO:0005496 steroid binding IEP Neighborhood
    CC GO:0005575 cellular_component IEP Neighborhood
    CC GO:0005667 transcription factor complex IEP Neighborhood
    CC GO:0005672 transcription factor TFIIA complex IEP Neighborhood
    CC GO:0005739 mitochondrion IEP Neighborhood
    CC GO:0005834 heterotrimeric G-protein complex IEP Neighborhood
    CC GO:0005853 eukaryotic translation elongation factor 1 complex IEP Neighborhood
    BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
    BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
    BP GO:0006413 translational initiation IEP Neighborhood
    BP GO:0006414 translational elongation IEP Neighborhood
    BP GO:0006417 regulation of translation IEP Neighborhood
    BP GO:0006448 regulation of translational elongation IEP Neighborhood
    BP GO:0006605 protein targeting IEP Neighborhood
    BP GO:0006612 protein targeting to membrane IEP Neighborhood
    BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
    BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
    BP GO:0006810 transport IEP Neighborhood
    BP GO:0007165 signal transduction IEP Neighborhood
    BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
    BP GO:0008104 protein localization IEP Neighborhood
    MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
    MF GO:0008312 7S RNA binding IEP Neighborhood
    BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
    BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
    BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
    BP GO:0009987 cellular process IEP Neighborhood
    BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
    BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
    BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
    BP GO:0010629 negative regulation of gene expression IEP Neighborhood
    MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
    BP GO:0015031 protein transport IEP Neighborhood
    BP GO:0015833 peptide transport IEP Neighborhood
    CC GO:0016272 prefoldin complex IEP Neighborhood
    MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
    MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
    BP GO:0017148 negative regulation of translation IEP Neighborhood
    BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
    BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
    BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
    BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
    BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
    BP GO:0032269 negative regulation of cellular protein metabolic process IEP Neighborhood
    BP GO:0032774 RNA biosynthetic process IEP Neighborhood
    MF GO:0032934 sterol binding IEP Neighborhood
    CC GO:0032991 protein-containing complex IEP Neighborhood
    BP GO:0033036 macromolecule localization IEP Neighborhood
    BP GO:0033365 protein localization to organelle IEP Neighborhood
    BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
    BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
    BP GO:0034613 cellular protein localization IEP Neighborhood
    BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
    BP GO:0042886 amide transport IEP Neighborhood
    CC GO:0044424 intracellular part IEP Neighborhood
    CC GO:0044428 nuclear part IEP Neighborhood
    CC GO:0044444 cytoplasmic part IEP Neighborhood
    CC GO:0044451 nucleoplasm part IEP Neighborhood
    CC GO:0044459 plasma membrane part IEP Neighborhood
    CC GO:0044464 cell part IEP Neighborhood
    CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
    BP GO:0045047 protein targeting to ER IEP Neighborhood
    BP GO:0045184 establishment of protein localization IEP Neighborhood
    BP GO:0045900 negative regulation of translational elongation IEP Neighborhood
    CC GO:0048500 signal recognition particle IEP Neighborhood
    BP GO:0048519 negative regulation of biological process IEP Neighborhood
    BP GO:0048523 negative regulation of cellular process IEP Neighborhood
    BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
    BP GO:0051179 localization IEP Neighborhood
    BP GO:0051234 establishment of localization IEP Neighborhood
    BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
    BP GO:0051248 negative regulation of protein metabolic process IEP Neighborhood
    BP GO:0070727 cellular macromolecule localization IEP Neighborhood
    BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
    BP GO:0071702 organic substance transport IEP Neighborhood
    BP GO:0071705 nitrogen compound transport IEP Neighborhood
    BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
    BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
    BP GO:0072657 protein localization to membrane IEP Neighborhood
    BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
    CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
    CC GO:0098797 plasma membrane protein complex IEP Neighborhood
    CC GO:1905360 GTPase complex IEP Neighborhood
    BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood

    No InterPro domains available for this sequence

    No external refs found!