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  5. AMTR_s00139p00079430

AMTR_s00139p00079430 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00139.15

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000006 (SeedPlants) Phylogenetic Tree(s): OG_06_0000006_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00139p00079430
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00225650 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00068p00099460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT1G16490 MYB58, ATMYB58 myb domain protein 58 0.02 Archaeplastida
AT1G22640 MYB3, ATMYB3 myb domain protein 3 0.02 Archaeplastida
AT1G25340 MYB116, AtMYB116 myb domain protein 116 0.02 Archaeplastida
AT1G68320 BW62B, BW62C,... myb domain protein 62 0.02 Archaeplastida
AT2G47190 MYB2, ATMYB2 myb domain protein 2 0.02 Archaeplastida
AT3G01530 MYB57, ATMYB57 myb domain protein 57 0.04 Archaeplastida
AT3G23250 ATMYB15, ATY19, MYB15 myb domain protein 15 0.03 Archaeplastida
AT3G24310 MYB305, ATMYB71 myb domain protein 305 0.04 Archaeplastida
AT3G27810 ATMYB21, MYB21, ATMYB3 myb domain protein 21 0.03 Archaeplastida
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.03 Archaeplastida
AT3G53200 AtMYB27, MYB27 myb domain protein 27 0.02 Archaeplastida
AT4G05100 AtMYB74, MYB74 myb domain protein 74 0.02 Archaeplastida
AT4G09460 MYB6, AtMYB6 myb domain protein 6 0.02 Archaeplastida
AT4G21440 ATMYB102, ATM4, MYB102 MYB-like 102 0.03 Archaeplastida
AT5G26660 MYB86, ATMYB86 myb domain protein 86 0.02 Archaeplastida
AT5G40330 ATMYBRTF, ATMYB23, MYB23 myb domain protein 23 0.04 Archaeplastida
AT5G40350 MYB24, AtMYB24 myb domain protein 24 0.03 Archaeplastida
AT5G40360 MYB115, AtMYB115 myb domain protein 115 0.03 Archaeplastida
AT5G49330 PFG3, ATMYB111, MYB111 myb domain protein 111 0.03 Archaeplastida
AT5G52600 AtMYB82, MYB82 myb domain protein 82 0.03 Archaeplastida
AT5G62470 MYBCOV1, MYB96, ATMYB96 myb domain protein 96 0.03 Archaeplastida
AT5G67300 MYBR1, MYB44,... myb domain protein r1 0.06 Archaeplastida
Cpa|evm.model.tig00000448.26 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
Cpa|evm.model.tig00021038.78 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Cre02.g108350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01000450001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01007740001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01009566001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01010086001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01017716001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01023531001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01026481001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01028171001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028328001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01034943001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_00379 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_03227 No alias transcription factor (MYB) 0.06 Archaeplastida
Gb_11232 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_22239 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_24073 No alias transcription factor (MYB) 0.05 Archaeplastida
Gb_29789 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_33428 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_35820 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g16810.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g45090.1 No alias transcription factor (MYB) 0.06 Archaeplastida
LOC_Os01g50110.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os01g52410.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g74590.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os02g09480.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os02g41510.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g04900.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os03g19120.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g20090.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os04g43680.1 No alias transcription factor (MYB) 0.06 Archaeplastida
LOC_Os04g45020.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g35500.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g48010.1 No alias transcription factor (MYB) 0.07 Archaeplastida
LOC_Os06g10350.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os06g14670.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os06g43090.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os07g31470.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os07g48870.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os10g33810.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os10g35660.1 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10217366g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10429682g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10430220g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10434028g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_117992g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_1201g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_124887g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_1261g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_128871g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_15502g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_15687g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_158319g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_246142g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_257850g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_278282g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_316475g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_45091g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_4783697g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_492415g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_6285g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_7724066g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_8206949g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_948059g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_9818613g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_9831998g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
Mp5g13060.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp5g14610.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Mp8g11870.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.02 Archaeplastida
Pp3c1_1650V3.1 No alias myb domain protein 105 0.03 Archaeplastida
Pp3c1_21610V3.1 No alias myb domain protein 103 0.02 Archaeplastida
Pp3c20_8950V3.1 No alias myb domain protein r1 0.02 Archaeplastida
Solyc01g057910.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc01g094360.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g092930.1.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc02g093740.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc03g005570.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g025870.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g112890.1.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g116100.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g119370.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc04g078420.1.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g014290.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g053150.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc06g065100.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc06g074910.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc06g083900.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g053230.3.1 No alias transcription factor (MYB) 0.08 Archaeplastida
Solyc08g008480.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc12g005640.2.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc12g099130.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e001492_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e004114_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e004568_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e005044_P002 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e007422_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e013910_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e015235_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e016583_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e017496_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e018471_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e020993_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e023100_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e023733_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e025724_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e025867_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e026426_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e027003_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e028085_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e030480_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e031799_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e034072_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e037510_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e037956_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e039756_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e041239_P001 No alias transcription factor (MYB) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 111
IPR001005 SANT/Myb 14 61
No external refs found!