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  5. AMTR_s00143p00063650

AMTR_s00143p00063650 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00143.13

No description available


Gene families : OG0000166 (Archaeplastida) Phylogenetic Tree(s): OG0000166_tree ,
OG_05_0000070 (LandPlants) Phylogenetic Tree(s): OG_05_0000070_tree ,
OG_06_0000023 (SeedPlants) Phylogenetic Tree(s): OG_06_0000023_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00143p00063650
Cluster HCCA: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00214630 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00019p00244510 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00045p00047860 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00060p00072400 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00063p00206790 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00170p00015580 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s02768p00003550 No alias No description available 0.04 Archaeplastida
AMTR_s02799p00005340 No alias No description available 0.04 Archaeplastida
AMTR_s04199p00003110 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s05067p00004370 No alias No description available 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004565 beta-galactosidase activity IEP Neighborhood
CC GO:0009341 beta-galactosidase complex IEP Neighborhood
MF GO:0015925 galactosidase activity IEP Neighborhood
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0033897 ribonuclease T2 activity IEP Neighborhood
InterPro domains Description Start Stop
IPR007021 DUF659 96 239
No external refs found!