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  5. AMTR_s00146p00085750

AMTR_s00146p00085750 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00146.51

Description : Protein ALP1-like OS=Arabidopsis thaliana


Gene families : OG0003754 (Archaeplastida) Phylogenetic Tree(s): OG0003754_tree ,
OG_05_0002880 (LandPlants) Phylogenetic Tree(s): OG_05_0002880_tree ,
OG_06_0003389 (SeedPlants) Phylogenetic Tree(s): OG_06_0003389_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00146p00085750
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AT4G29780 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.11 Archaeplastida
GSVIVT01035416001 No alias Protein ALP1-like OS=Arabidopsis thaliana 0.06 Archaeplastida
LOC_Os01g40070.1 No alias Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1... 0.1 Archaeplastida
LOC_Os05g51520.1 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_7435g0010 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc07g040960.1.1 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.11 Archaeplastida
Solyc08g062680.1.1 No alias no hits & (original description: none) 0.11 Archaeplastida
Solyc12g009000.1.1 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.12 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
CC GO:0031012 extracellular matrix IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!