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  5. AMTR_s00147p00067470

AMTR_s00147p00067470 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00147.28

No description available


Gene families : OG0001648 (Archaeplastida) Phylogenetic Tree(s): OG0001648_tree ,
OG_05_0001064 (LandPlants) Phylogenetic Tree(s): OG_05_0001064_tree ,
OG_06_0000804 (SeedPlants) Phylogenetic Tree(s): OG_06_0000804_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00147p00067470
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT1G49000 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.02 Archaeplastida
AT3G18560 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.04 Archaeplastida
Pp3c24_20430V3.1 No alias No annotation 0.02 Archaeplastida
Solyc02g091380.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc03g119810.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e024964_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e027966_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e031031_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005199 structural constituent of cell wall IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016841 ammonia-lyase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!