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  5. AMTR_s00149p00067730

AMTR_s00149p00067730 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00149.45

No description available


Gene families : OG0004267 (Archaeplastida) Phylogenetic Tree(s): OG0004267_tree ,
OG_05_0002950 (LandPlants) Phylogenetic Tree(s): OG_05_0002950_tree ,
OG_06_0019788 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00149p00067730
Cluster HCCA: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
AT4G16390 SVR7 pentatricopeptide (PPR) repeat-containing protein 0.04 Archaeplastida
AT5G46580 No alias pentatricopeptide (PPR) repeat-containing protein 0.07 Archaeplastida
GSVIVT01003493001 No alias Pentatricopeptide repeat-containing protein At4g16390,... 0.06 Archaeplastida
GSVIVT01003496001 No alias Pentatricopeptide repeat-containing protein At4g16390,... 0.04 Archaeplastida
Gb_19282 No alias Pentatricopeptide repeat-containing protein At5g46580,... 0.04 Archaeplastida
LOC_Os03g11670.1 No alias Pentatricopeptide repeat-containing protein ATP4... 0.03 Archaeplastida
MA_283144g0010 No alias Pentatricopeptide repeat-containing protein At5g46580,... 0.04 Archaeplastida
Pp3c15_12010V3.1 No alias pentatricopeptide (PPR) repeat-containing protein 0.05 Archaeplastida
Pp3c9_6880V3.1 No alias pentatricopeptide (PPR) repeat-containing protein 0.02 Archaeplastida
Smo10825 No alias Pentatricopeptide repeat-containing protein At5g46580,... 0.03 Archaeplastida
Solyc08g077120.2.1 No alias No annotation 0.03 Archaeplastida
Solyc08g077140.1.1 No alias Pentatricopeptide repeat-containing protein At5g46580,... 0.04 Archaeplastida
Solyc11g012670.1.1 No alias Pentatricopeptide repeat-containing protein At4g16390,... 0.07 Archaeplastida
Zm00001e000850_P001 No alias Pentatricopeptide repeat-containing protein ATP4,... 0.05 Archaeplastida
Zm00001e006409_P001 No alias Pentatricopeptide repeat-containing protein At5g46580,... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004556 alpha-amylase activity IEP Neighborhood
MF GO:0004645 phosphorylase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006772 thiamine metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008184 glycogen phosphorylase activity IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009228 thiamine biosynthetic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016987 sigma factor activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042723 thiamine-containing compound metabolic process IEP Neighborhood
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!