AMTR_s00149p00068500 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00149.46

Description : RNA biosynthesis.transcriptional activation.NAC transcription factor

Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000015 (LandPlants) Phylogenetic Tree(s): OG_05_0000015_tree ,
OG_06_0000234 (SeedPlants) Phylogenetic Tree(s): OG_06_0000234_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00149p00068500
Cluster	HCCA: Cluster_95

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00017p00255350	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
AMTR_s00059p00187950	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00113p00077540	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AT1G32770	ANAC012, NST3,...	NAC domain containing protein 12	0.03	Archaeplastida
AT1G52890	ANAC019, NAC019	NAC domain containing protein 19	0.04	Archaeplastida
AT1G79580	SMB, ANAC033	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
AT2G33480	NAC041, ANAC041	NAC domain containing protein 41	0.04	Archaeplastida
AT2G43000	NAC042, anac042	NAC domain containing protein 42	0.02	Archaeplastida
AT2G46770	NST1, ANAC043, EMB2301	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
AT3G12910	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
AT3G12977	No alias	NAC (No Apical Meristem) domain transcriptional...	0.04	Archaeplastida
AT3G15500	ATNAC3, ANAC055,...	NAC domain containing protein 3	0.03	Archaeplastida
AT3G15510	NARS1, NAC2,...	NAC domain containing protein 2	0.03	Archaeplastida
AT3G61910	NST2, NAC066, ANAC066	NAC domain protein 66	0.03	Archaeplastida
AT4G28530	anac074, NAC074	NAC domain containing protein 74	0.03	Archaeplastida
AT5G04400	NAC077, anac077	NAC domain containing protein 77	0.03	Archaeplastida
AT5G13180	VNI2, NAC083, ANAC083	NAC domain containing protein 83	0.04	Archaeplastida
GSVIVT01007982001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01008839001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
GSVIVT01018809001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01020478001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
GSVIVT01020834001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01022354001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
Gb_05670	No alias	transcription factor (NAC)	0.03	Archaeplastida
Gb_07132	No alias	transcription factor (NAC)	0.04	Archaeplastida
Gb_35309	No alias	transcription factor (NAC)	0.02	Archaeplastida
Gb_37720	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os01g60020.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os02g56600.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os03g60080.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os05g34310.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os05g34830.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os06g33940.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os06g51070.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os07g12340.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os08g02300.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os09g32260.2	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os10g42130.1	No alias	transcription factor (NAC)	0.01	Archaeplastida
MA_10426704g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_137415g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_18939g0010	No alias	no hits & (original description: none)	0.01	Archaeplastida
MA_23113g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_33912g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_5017g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_5115g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_6777g0010	No alias	No annotation	0.02	Archaeplastida
MA_73369g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_80232g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
Mp2g07720.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Mp6g02590.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Mp6g02670.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Pp3c13_10800V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Archaeplastida
Pp3c3_25610V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Archaeplastida
Smo147012	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
Solyc02g069960.4.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc02g084350.3.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc05g007550.3.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc07g045030.4.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc10g006880.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc10g055760.2.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc12g013620.2.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc12g036480.2.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e001536_P002	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e001540_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e004117_P001	No alias	transcription factor (NAC)	0.01	Archaeplastida
Zm00001e006136_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e006914_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e009384_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e011786_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e014924_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e018103_P002	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e022155_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e022817_P003	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e024028_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e031703_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e034914_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e035277_P002	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e035884_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e036590_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e038267_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e039557_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Neighborhood
BP	GO:0000272	polysaccharide catabolic process	IEP	Neighborhood
MF	GO:0003712	transcription coregulator activity	IEP	Neighborhood
MF	GO:0003779	actin binding	IEP	Neighborhood
MF	GO:0004402	histone acetyltransferase activity	IEP	Neighborhood
MF	GO:0004560	alpha-L-fucosidase activity	IEP	Neighborhood
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005509	calcium ion binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0005975	carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0005984	disaccharide metabolic process	IEP	Neighborhood
BP	GO:0005991	trehalose metabolic process	IEP	Neighborhood
BP	GO:0005992	trehalose biosynthetic process	IEP	Neighborhood
BP	GO:0006826	iron ion transport	IEP	Neighborhood
BP	GO:0007155	cell adhesion	IEP	Neighborhood
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Neighborhood
MF	GO:0015928	fucosidase activity	IEP	Neighborhood
MF	GO:0016160	amylase activity	IEP	Neighborhood
MF	GO:0016161	beta-amylase activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016668	oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor	IEP	Neighborhood
MF	GO:0016987	sigma factor activity	IEP	Neighborhood
CC	GO:0019898	extrinsic component of membrane	IEP	Neighborhood
BP	GO:0022610	biological adhesion	IEP	Neighborhood
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	Neighborhood
BP	GO:0034755	iron ion transmembrane transport	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
BP	GO:0046351	disaccharide biosynthetic process	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
MF	GO:0047134	protein-disulfide reductase activity	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	6	134

External Links

No external refs found!

AMTR_s00149p00068500 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation