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  5. AMTR_s00149p00090220

AMTR_s00149p00090220 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00149.76

No description available


Gene families : OG0000783 (Archaeplastida) Phylogenetic Tree(s): OG0000783_tree ,
OG_05_0001600 (LandPlants) Phylogenetic Tree(s): OG_05_0001600_tree ,
OG_06_0039972 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00149p00090220
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01010731001 No alias Ankyrin repeat-containing protein At5g02620... 0.03 Archaeplastida
GSVIVT01013543001 No alias No description available 0.04 Archaeplastida
LOC_Os11g15460.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc05g055960.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc07g061740.4.1 No alias Ankyrin repeat-containing protein At5g02620... 0.04 Archaeplastida
Solyc07g061750.4.1 No alias Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.04 Archaeplastida
Solyc07g061760.3.1 No alias Ankyrin repeat-containing protein At5g02620... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 49 114
No external refs found!