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  5. AMTR_s00152p00086510

AMTR_s00152p00086510 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00152.30

Description : Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0013984 (Archaeplastida) Phylogenetic Tree(s): OG0013984_tree ,
OG_05_0020453 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0019651 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00152p00086510
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00034p00144680 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g31850,... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 6 36
IPR002885 Pentatricopeptide_repeat 45 92
No external refs found!