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  5. AMTR_s00169p00027070

AMTR_s00169p00027070 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00169.13

Description : Late embryogenesis abundant protein Lea14-A OS=Gossypium hirsutum


Gene families : OG0004152 (Archaeplastida) Phylogenetic Tree(s): OG0004152_tree ,
OG_05_0003582 (LandPlants) Phylogenetic Tree(s): OG_05_0003582_tree ,
OG_06_0004531 (SeedPlants) Phylogenetic Tree(s): OG_06_0004531_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00169p00027070
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
Gb_00016 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os07g17120.1 No alias Late embryogenesis abundant protein Lea14-A OS=Gossypium... 0.04 Archaeplastida
Mp1g26580.1 No alias Late embryogenesis abundant protein Lea14-A OS=Gossypium... 0.02 Archaeplastida
Zm00001e033253_P001 No alias Late embryogenesis abundant protein Lea14-A OS=Gossypium... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0004871 obsolete signal transducer activity IEP Neighborhood
CC GO:0005834 heterotrimeric G-protein complex IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0030029 actin filament-based process IEP Neighborhood
BP GO:0030036 actin cytoskeleton organization IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
CC GO:1905360 GTPase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR004864 LEA_2 192 286
IPR004864 LEA_2 67 162
No external refs found!