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  5. AMTR_s00171p00044550

AMTR_s00171p00044550 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00171.24

No description available


Gene families : OG0000287 (Archaeplastida) Phylogenetic Tree(s): OG0000287_tree ,
OG_05_0000195 (LandPlants) Phylogenetic Tree(s): OG_05_0000195_tree ,
OG_06_0001887 (SeedPlants) Phylogenetic Tree(s): OG_06_0001887_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00171p00044550
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00178790 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00010p00025560 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT1G54890 No alias Late embryogenesis abundant (LEA) protein-related 0.03 Archaeplastida
AT3G19430 No alias late embryogenesis abundant protein-related / LEA protein-related 0.04 Archaeplastida
AT4G27400 No alias Late embryogenesis abundant (LEA) protein-related 0.04 Archaeplastida
AT5G54370 No alias Late embryogenesis abundant (LEA) protein-related 0.04 Archaeplastida
AT5G60520 No alias Late embryogenesis abundant (LEA) protein-related 0.02 Archaeplastida
AT5G60530 No alias late embryogenesis abundant protein-related / LEA protein-related 0.03 Archaeplastida
GSVIVT01005843001 No alias No description available 0.03 Archaeplastida
GSVIVT01005845001 No alias No description available 0.03 Archaeplastida
Gb_08582 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_15126 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_38738 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g73700.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g73710.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os01g73720.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os01g73730.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os05g01680.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os05g47940.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os11g05360.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_558137g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_6494080g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_6640022g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_6771381g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_74876g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_7605738g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_8955g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_957739g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp1g03490.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp1g11810.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mpzg00310.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c20_18650V3.1 No alias Late embryogenesis abundant (LEA) protein-related 0.03 Archaeplastida
Pp3c23_2610V3.1 No alias Late embryogenesis abundant (LEA) protein-related 0.03 Archaeplastida
Pp3c23_2628V3.1 No alias No annotation 0.03 Archaeplastida
Pp3s49_30V3.1 No alias Late embryogenesis abundant (LEA) protein-related 0.03 Archaeplastida
Solyc01g107710.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc01g107720.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc02g078930.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc06g034130.2.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc08g066590.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g069280.2.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc11g073140.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc11g073150.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e002062_P001 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e018525_P001 No alias no hits & (original description: none) 0.09 Archaeplastida
Zm00001e018526_P001 No alias no hits & (original description: none) 0.09 Archaeplastida
Zm00001e018527_P001 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e021386_P001 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e024129_P001 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e028269_P001 No alias no hits & (original description: none) 0.09 Archaeplastida
Zm00001e029686_P001 No alias no hits & (original description: none) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003840 obsolete gamma-glutamyltransferase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006749 glutathione metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR009646 Root_cap 278 334
No external refs found!