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  5. AMTR_s00171p00047680

AMTR_s00171p00047680 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00171.28

Description : Solute transport.channels.MIP family.tonoplast intrinsic protein (TIP-type)


Gene families : OG0000026 (Archaeplastida) Phylogenetic Tree(s): OG0000026_tree ,
OG_05_0000266 (LandPlants) Phylogenetic Tree(s): OG_05_0000266_tree ,
OG_06_0001290 (SeedPlants) Phylogenetic Tree(s): OG_06_0001290_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00171p00047680
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
AT1G17810 BETA-TIP beta-tonoplast intrinsic protein 0.02 Archaeplastida
AT1G73190 ALPHA-TIP, TIP3;1 Aquaporin-like superfamily protein 0.02 Archaeplastida
GSVIVT01017896001 No alias Solute transport.channels.MIP family.Nodulin-26-like... 0.02 Archaeplastida
GSVIVT01026944001 No alias Solute transport.channels.MIP family.plasma membrane... 0.04 Archaeplastida
MA_6484736g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp4g05930.1 No alias plasma membrane intrinsic protein (PIP) 0.03 Archaeplastida
Mp8g11200.1 No alias Nodulin-26-like intrinsic protein (NIP) 0.02 Archaeplastida
Pp3c4_14920V3.1 No alias NOD26-like intrinsic protein 5;1 0.02 Archaeplastida
Smo165035 No alias Solute transport.channels.MIP family.tonoplast intrinsic... 0.05 Archaeplastida
Smo165578 No alias Solute transport.channels.MIP family.Nodulin-26-like... 0.03 Archaeplastida
Smo98603 No alias Solute transport.channels.MIP family.plasma membrane... 0.03 Archaeplastida
Solyc05g008080.3.1 No alias Nodulin-26-like intrinsic protein (NIP) 0.03 Archaeplastida
Solyc05g055990.4.1 No alias plasma membrane intrinsic protein (PIP) 0.1 Archaeplastida
Zm00001e000373_P001 No alias tonoplast intrinsic protein (TIP) 0.03 Archaeplastida
Zm00001e004496_P002 No alias tonoplast intrinsic protein (TIP) 0.03 Archaeplastida
Zm00001e007523_P001 No alias tonoplast intrinsic protein (TIP) 0.02 Archaeplastida
Zm00001e012616_P002 No alias tonoplast intrinsic protein (TIP) 0.02 Archaeplastida
Zm00001e033411_P002 No alias plasma membrane intrinsic protein (PIP) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEA Interproscan
BP GO:0006810 transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000425 MIP 14 233
No external refs found!