AMTR_s00203p00009790 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00203.1

Description : Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa subsp. japonica

Gene families : OG0010820 (Archaeplastida) Phylogenetic Tree(s): OG0010820_tree ,
OG_05_0010007 (LandPlants) Phylogenetic Tree(s): OG_05_0010007_tree ,
OG_06_0011187 (SeedPlants) Phylogenetic Tree(s): OG_06_0011187_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00203p00009790
Cluster	HCCA: Cluster_74

Target	Alias	Description	ECC score	Gene Family Method	Actions
Gb_02172	No alias	Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis...	0.05	Archaeplastida
Zm00001e006573_P002	No alias	Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003678	DNA helicase activity	IEP	Neighborhood
MF	GO:0003725	double-stranded RNA binding	IEP	Neighborhood
MF	GO:0003916	DNA topoisomerase activity	IEP	Neighborhood
MF	GO:0003917	DNA topoisomerase type I activity	IEP	Neighborhood
MF	GO:0004221	obsolete ubiquitin thiolesterase activity	IEP	Neighborhood
MF	GO:0004527	exonuclease activity	IEP	Neighborhood
MF	GO:0004806	triglyceride lipase activity	IEP	Neighborhood
CC	GO:0005694	chromosome	IEP	Neighborhood
BP	GO:0006265	DNA topological change	IEP	Neighborhood
BP	GO:0008219	cell death	IEP	Neighborhood
MF	GO:0016298	lipase activity	IEP	Neighborhood
BP	GO:0051276	chromosome organization	IEP	Neighborhood
BP	GO:0071103	DNA conformation change	IEP	Neighborhood
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR021099	PORR_domain	29	364

External Links

No external refs found!