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  5. AMTR_s00479p00009780

AMTR_s00479p00009780 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00479.3

Description : Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase


Gene families : OG0000083 (Archaeplastida) Phylogenetic Tree(s): OG0000083_tree ,
OG_05_0000032 (LandPlants) Phylogenetic Tree(s): OG_05_0000032_tree ,
OG_06_0000585 (SeedPlants) Phylogenetic Tree(s): OG_06_0000585_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00479p00009780
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00254910 evm_27.TU.AmTr_v1... Enzyme classification.EC_2 transferases.EC_2.4... 0.03 Archaeplastida
AMTR_s00039p00108090 evm_27.TU.AmTr_v1... Enzyme classification.EC_2 transferases.EC_2.4... 0.05 Archaeplastida
AMTR_s00061p00180700 evm_27.TU.AmTr_v1... UDP-glycosyltransferase 89B1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_26137 No alias UDP-glycosyltransferase 92A1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os02g11130.1 No alias UDP-glycosyltransferase 73D1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc12g042600.2.1 No alias UDP-glycosyltransferase 73C4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e006739_P003 No alias flavonol-3-O-glycoside rhamnosyltransferase 0.02 Archaeplastida
Zm00001e031181_P001 No alias UDP-glycosyltransferase 73C4 OS=Arabidopsis thaliana... 0.01 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0008152 metabolic process IEA Interproscan
MF GO:0016758 transferase activity, transferring hexosyl groups IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Neighborhood
CC GO:0005849 mRNA cleavage factor complex IEP Neighborhood
BP GO:0006378 mRNA polyadenylation IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008175 tRNA methyltransferase activity IEP Neighborhood
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Neighborhood
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
InterPro domains Description Start Stop
IPR002213 UDP_glucos_trans 40 123
No external refs found!