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  5. AMTR_s02071p00000020

AMTR_s02071p00000020 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold02071.1

Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS7 component


Gene families : OG0002240 (Archaeplastida) Phylogenetic Tree(s): OG0002240_tree ,
OG_05_0003104 (LandPlants) Phylogenetic Tree(s): OG_05_0003104_tree ,
OG_06_0001925 (SeedPlants) Phylogenetic Tree(s): OG_06_0001925_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s02071p00000020
Cluster HCCA: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
AT2G07696 No alias Ribosomal protein S7p/S5e family protein 0.04 Archaeplastida
ATCG00900 RPS7.1, RPS7 Ribosomal protein S7p/S5e family protein 0.03 Archaeplastida
ATCG01240 RPS7.2 ribosomal protein S7 0.03 Archaeplastida
ATMG01270 RPS7 mitochondrial ribosomal protein S7 0.04 Archaeplastida
Gb_04094 No alias Ribosomal protein S7, mitochondrial OS=Marchantia... 0.03 Archaeplastida
Gb_26489 No alias Ribosomal protein S7, mitochondrial OS=Arabidopsis... 0.04 Archaeplastida
Gb_37211 No alias Ribosomal protein S7, mitochondrial OS=Marchantia... 0.05 Archaeplastida
LOC_Os12g34045.1 No alias component mtRPS7 of small ribosomal subunit proteome 0.03 Archaeplastida
Zm00001e042090_P001 No alias component psRPS7 of small ribosomal subunit proteome 0.02 Archaeplastida
Zm00001e042267_P001 No alias component psRPS7 of small ribosomal subunit proteome 0.02 Archaeplastida
Zm00001e042356_P001 No alias component psRPS7 of small ribosomal subunit proteome 0.02 Archaeplastida
Zm00001e042499_P001 No alias component psRPS7 of small ribosomal subunit proteome 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0008535 respiratory chain complex IV assembly IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0031360 intrinsic component of thylakoid membrane IEP Neighborhood
CC GO:0031361 integral component of thylakoid membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR023798 Ribosomal_S7_dom 1 125
No external refs found!