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  5. AMTR_s04070p00004990

AMTR_s04070p00004990


No description available


Gene families : OG0000166 (Archaeplastida) Phylogenetic Tree(s): OG0000166_tree ,
OG_05_0000070 (LandPlants) Phylogenetic Tree(s): OG_05_0000070_tree ,
OG_06_0000023 (SeedPlants) Phylogenetic Tree(s): OG_06_0000023_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s04070p00004990
Cluster HCCA: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00205930 No alias No description available 0.05 Archaeplastida
AMTR_s00004p00235940 evm_27.TU.AmTr_v1... No description available 0.07 Archaeplastida
AMTR_s00007p00259360 No alias No description available 0.04 Archaeplastida
AMTR_s00013p00218720 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00014p00055820 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00019p00170780 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00061p00211920 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00063p00206790 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00064p00040440 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00068p00085390 No alias No description available 0.06 Archaeplastida
AMTR_s00068p00178380 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00091p00168090 evm_27.TU.AmTr_v1... No description available 0.08 Archaeplastida
AMTR_s02148p00006070 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s02799p00005340 No alias No description available 0.05 Archaeplastida
AMTR_s03230p00001990 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s03780p00001460 No alias No description available 0.04 Archaeplastida
AMTR_s03882p00002020 No alias No description available 0.02 Archaeplastida
AMTR_s04525p00001750 evm_27.TU.AmTr_v1... No description available 0.07 Archaeplastida
AMTR_s05692p00005270 No alias No description available 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Neighborhood
MF GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008649 rRNA methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016433 rRNA (adenine) methyltransferase activity IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
InterPro domains Description Start Stop
IPR007021 DUF659 42 130
No external refs found!