1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s04495p00005620

AMTR_s04495p00005620 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold04495.3

Description : Cellular respiration.oxidative phosphorylation.cytochrome c.CCM cytochrome c maturation system (system I).apocytochrome-heme assembly complex.CcmFn component


Gene families : OG0001746 (Archaeplastida) Phylogenetic Tree(s): OG0001746_tree ,
OG_05_0001332 (LandPlants) Phylogenetic Tree(s): OG_05_0001332_tree ,
OG_06_0000813 (SeedPlants) Phylogenetic Tree(s): OG_06_0000813_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s04495p00005620
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
ATMG00960 CCB203 Cytochrome C assembly protein 0.04 Archaeplastida
Gb_15255 No alias component CcmFn of apocytochrome-heme assembly complex 0.05 Archaeplastida
Gb_21631 No alias component CcmFn of apocytochrome-heme assembly complex 0.08 Archaeplastida
Gb_33989 No alias component CcmFn of apocytochrome-heme assembly complex 0.07 Archaeplastida
Gb_35167 No alias component CcmFn of apocytochrome-heme assembly complex 0.02 Archaeplastida
Solyc12g035895.1.1 No alias component CcmFn of apocytochrome-heme assembly complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0008535 respiratory chain complex IV assembly IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
BP GO:0009767 photosynthetic electron transport chain IEP Neighborhood
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
CC GO:0031360 intrinsic component of thylakoid membrane IEP Neighborhood
CC GO:0031361 integral component of thylakoid membrane IEP Neighborhood
BP GO:0042773 ATP synthesis coupled electron transport IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002541 Cyt_c_assembly 53 194
No external refs found!