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  5. Cpa|evm.model.tig00000057.93

Cpa|evm.model.tig00000057.93


Description : DNA mismatch repair protein PMS1 OS=Arabidopsis thaliana


Gene families : OG0004752 (Archaeplastida) Phylogenetic Tree(s): OG0004752_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000057.93
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Cre04.g227000 No alias DNA damage response.DNA repair mechanisms.mismatch... 0.03 Archaeplastida
GSVIVT01027985001 No alias DNA damage response.DNA repair mechanisms.mismatch... 0.01 Archaeplastida
LOC_Os02g37920.1 No alias component PMS1 of MLH1-PMS1 heterodimer 0.02 Archaeplastida
Mp1g00290.1 No alias component PMS1 of MLH1-PMS1 heterodimer 0.01 Archaeplastida
Pp3c8_22650V3.1 No alias DNA mismatch repair protein, putative 0.02 Archaeplastida
Solyc09g074990.4.1 No alias component PMS1 of MLH1-PMS1 heterodimer 0.02 Archaeplastida
Zm00001e022851_P002 No alias component PMS1 of MLH1-PMS1 heterodimer 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006298 mismatch repair IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013507 DNA_mismatch_S5_2-like 166 291
IPR014790 MutL_C 482 597
No external refs found!