Coexpression cluster: Cluster_69 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044464 cell part 14.29% (10/70) 2.61 5e-06 0.000193
GO:0006996 organelle organization 5.71% (4/70) 5.14 5e-06 0.000255
GO:0006259 DNA metabolic process 10.0% (7/70) 3.43 4e-06 0.0003
GO:0044424 intracellular part 14.29% (10/70) 2.72 3e-06 0.000389
GO:0043226 organelle 8.57% (6/70) 3.44 1.9e-05 0.000492
GO:0043229 intracellular organelle 8.57% (6/70) 3.46 1.8e-05 0.000557
GO:0005634 nucleus 5.71% (4/70) 4.35 4.4e-05 0.000972
GO:0051276 chromosome organization 4.29% (3/70) 5.24 6.8e-05 0.001298
GO:0043231 intracellular membrane-bounded organelle 5.71% (4/70) 3.94 0.000137 0.002094
GO:0043227 membrane-bounded organelle 5.71% (4/70) 3.94 0.000137 0.002094
GO:0006260 DNA replication 4.29% (3/70) 4.73 0.0002 0.002778
GO:0005575 cellular_component 15.71% (11/70) 1.77 0.000342 0.003487
GO:0044430 cytoskeletal part 4.29% (3/70) 4.52 0.000303 0.003568
GO:0090304 nucleic acid metabolic process 10.0% (7/70) 2.42 0.000328 0.003583
GO:0016043 cellular component organization 5.71% (4/70) 3.67 0.000282 0.003593
GO:0071840 cellular component organization or biogenesis 5.71% (4/70) 3.52 0.000416 0.003982
GO:0006265 DNA topological change 2.86% (2/70) 5.88 0.000513 0.00436
GO:0003916 DNA topoisomerase activity 2.86% (2/70) 5.88 0.000513 0.00436
GO:0044446 intracellular organelle part 7.14% (5/70) 2.91 0.000547 0.004401
GO:0044422 organelle part 7.14% (5/70) 2.88 0.00059 0.004513
GO:0140097 catalytic activity, acting on DNA 4.29% (3/70) 4.17 0.000632 0.004607
GO:0071103 DNA conformation change 2.86% (2/70) 5.66 0.000705 0.004688
GO:0016459 myosin complex 2.86% (2/70) 5.66 0.000705 0.004688
GO:0005694 chromosome 2.86% (2/70) 5.56 0.000812 0.005174
GO:0003774 motor activity 4.29% (3/70) 3.61 0.001948 0.011923
GO:0048478 replication fork protection 1.43% (1/70) 8.46 0.002834 0.013549
GO:0051053 negative regulation of DNA metabolic process 1.43% (1/70) 8.46 0.002834 0.013549
GO:0045005 DNA-dependent DNA replication maintenance of fidelity 1.43% (1/70) 8.46 0.002834 0.013549
GO:0008156 negative regulation of DNA replication 1.43% (1/70) 8.46 0.002834 0.013549
GO:0090329 regulation of DNA-dependent DNA replication 1.43% (1/70) 8.46 0.002834 0.013549
GO:2000104 negative regulation of DNA-dependent DNA replication 1.43% (1/70) 8.46 0.002834 0.013549
GO:0006139 nucleobase-containing compound metabolic process 10.0% (7/70) 1.9 0.002675 0.015739
GO:0006725 cellular aromatic compound metabolic process 10.0% (7/70) 1.8 0.003932 0.017695
GO:0046483 heterocycle metabolic process 10.0% (7/70) 1.8 0.003842 0.017815
GO:1901360 organic cyclic compound metabolic process 10.0% (7/70) 1.78 0.004243 0.018548
GO:0034453 microtubule anchoring 1.43% (1/70) 7.46 0.00566 0.023403
GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity 1.43% (1/70) 7.46 0.00566 0.023403
GO:0034641 cellular nitrogen compound metabolic process 10.0% (7/70) 1.62 0.007596 0.030583
GO:0044260 cellular macromolecule metabolic process 10.0% (7/70) 1.61 0.007796 0.030585
GO:0000808 origin recognition complex 1.43% (1/70) 6.88 0.008478 0.031636
GO:0005815 microtubule organizing center 1.43% (1/70) 6.88 0.008478 0.031636
GO:0017111 nucleoside-triphosphatase activity 5.71% (4/70) 2.27 0.009522 0.034688
GO:0000226 microtubule cytoskeleton organization 1.43% (1/70) 6.46 0.011288 0.035245
GO:0006275 regulation of DNA replication 1.43% (1/70) 6.46 0.011288 0.035245
GO:0051052 regulation of DNA metabolic process 1.43% (1/70) 6.46 0.011288 0.035245
GO:0045934 negative regulation of nucleobase-containing compound metabolic process 1.43% (1/70) 6.46 0.011288 0.035245
GO:0016817 hydrolase activity, acting on acid anhydrides 5.71% (4/70) 2.22 0.010917 0.037118
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 5.71% (4/70) 2.22 0.010676 0.037123
GO:0016462 pyrophosphatase activity 5.71% (4/70) 2.23 0.010557 0.037562
GO:0000152 nuclear ubiquitin ligase complex 1.43% (1/70) 6.14 0.01409 0.038496
GO:2000113 negative regulation of cellular macromolecule biosynthetic process 1.43% (1/70) 6.14 0.01409 0.038496
GO:0031327 negative regulation of cellular biosynthetic process 1.43% (1/70) 6.14 0.01409 0.038496
GO:0010558 negative regulation of macromolecule biosynthetic process 1.43% (1/70) 6.14 0.01409 0.038496
GO:0009890 negative regulation of biosynthetic process 1.43% (1/70) 6.14 0.01409 0.038496
GO:0005680 anaphase-promoting complex 1.43% (1/70) 6.14 0.01409 0.038496
GO:0034645 cellular macromolecule biosynthetic process 4.29% (3/70) 2.63 0.012713 0.038901
GO:0061505 DNA topoisomerase II activity 1.43% (1/70) 5.88 0.016884 0.042349
GO:0031461 cullin-RING ubiquitin ligase complex 1.43% (1/70) 5.88 0.016884 0.042349
GO:0051172 negative regulation of nitrogen compound metabolic process 1.43% (1/70) 5.88 0.016884 0.042349
GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity 1.43% (1/70) 5.88 0.016884 0.042349
GO:0007010 cytoskeleton organization 1.43% (1/70) 5.88 0.016884 0.042349
GO:0031324 negative regulation of cellular metabolic process 1.43% (1/70) 5.66 0.019671 0.046303
GO:0008094 DNA-dependent ATPase activity 1.43% (1/70) 5.66 0.019671 0.046303
GO:0016853 isomerase activity 2.86% (2/70) 3.23 0.019229 0.046698
GO:0009059 macromolecule biosynthetic process 4.29% (3/70) 2.41 0.018995 0.046874
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_58 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_23 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_34 0.026 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_46 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_70 0.034 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_76 0.026 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_90 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_91 0.024 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_107 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_114 0.037 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_140 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_158 0.03 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_172 0.035 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_180 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_183 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_193 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_196 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_208 0.023 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_221 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_154 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_259 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_194 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_379 0.042 Archaeplastida Compare
Picea abies HCCA Cluster_401 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_35 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_236 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_10 0.028 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_88 0.038 Archaeplastida Compare
Sequences (70) (download table)

InterPro Domains

GO Terms

Family Terms