AT1G66140 (ZFP4)

Aliases : ZFP4

Description : zinc finger protein 4

Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0002182 (SeedPlants) Phylogenetic Tree(s): OG_06_0002182_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G66140
Cluster	HCCA: Cluster_212

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00079p00169240	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.03	Archaeplastida
AT3G09290	TAC1	telomerase activator1	0.03	Archaeplastida
AT3G23130	SUP, FLO10, FON1	C2H2 and C2HC zinc fingers superfamily protein	0.02	Archaeplastida
AT5G25160	ZFP3	zinc finger protein 3	0.03	Archaeplastida
AT5G57520	ATZFP2, ZFP2	zinc finger protein 2	0.03	Archaeplastida
GSVIVT01016493001	No alias	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.04	Archaeplastida
GSVIVT01031007001	No alias	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.02	Archaeplastida
LOC_Os01g04120.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
LOC_Os08g44190.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
LOC_Os09g27320.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
LOC_Os09g38610.1	No alias	C2H2 zinc finger transcription factor	0.04	Archaeplastida
MA_10430024g0010	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
MA_2800g0010	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
MA_54742g0010	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Pp3c26_13140V3.1	No alias	C2H2 and C2HC zinc fingers superfamily protein	0.02	Archaeplastida
Solyc03g117070.1.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Solyc05g009180.1.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Solyc09g089590.1.1	No alias	C2H2 zinc finger transcription factor	0.04	Archaeplastida
Solyc10g049870.1.1	No alias	C2H2 zinc finger transcription factor	0.05	Archaeplastida
Solyc10g078970.1.1	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida
Zm00001e009854_P001	No alias	C2H2 zinc finger transcription factor	0.05	Archaeplastida
Zm00001e010687_P001	No alias	C2H2 zinc finger transcription factor	0.04	Archaeplastida
Zm00001e032639_P001	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
Zm00001e034883_P001	No alias	C2H2 zinc finger transcription factor	0.02	Archaeplastida
Zm00001e035448_P001	No alias	C2H2 zinc finger transcription factor	0.04	Archaeplastida
Zm00001e036220_P001	No alias	C2H2 zinc finger transcription factor	0.04	Archaeplastida
Zm00001e036816_P001	No alias	C2H2 zinc finger transcription factor	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0002682	regulation of immune system process	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0004620	phospholipase activity	IEP	Neighborhood
MF	GO:0004629	phospholipase C activity	IEP	Neighborhood
CC	GO:0005886	plasma membrane	IEP	Neighborhood
BP	GO:0006612	protein targeting to membrane	IEP	Neighborhood
BP	GO:0006813	potassium ion transport	IEP	Neighborhood
BP	GO:0006928	movement of cell or subcellular component	IEP	Neighborhood
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Neighborhood
MF	GO:0008324	cation transmembrane transporter activity	IEP	Neighborhood
BP	GO:0009624	response to nematode	IEP	Neighborhood
BP	GO:0009751	response to salicylic acid	IEP	Neighborhood
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0009893	positive regulation of metabolic process	IEP	Neighborhood
BP	GO:0009962	regulation of flavonoid biosynthetic process	IEP	Neighborhood
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	IEP	Neighborhood
BP	GO:0010363	regulation of plant-type hypersensitive response	IEP	Neighborhood
BP	GO:0010941	regulation of cell death	IEP	Neighborhood
BP	GO:0014070	response to organic cyclic compound	IEP	Neighborhood
MF	GO:0015075	ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015077	monovalent inorganic cation transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Neighborhood
BP	GO:0016925	protein sumoylation	IEP	Neighborhood
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Neighborhood
BP	GO:0030001	metal ion transport	IEP	Neighborhood
BP	GO:0030048	actin filament-based movement	IEP	Neighborhood
BP	GO:0031347	regulation of defense response	IEP	Neighborhood
MF	GO:0031386	protein tag	IEP	Neighborhood
BP	GO:0043067	regulation of programmed cell death	IEP	Neighborhood
BP	GO:0045088	regulation of innate immune response	IEP	Neighborhood
BP	GO:0046677	response to antibiotic	IEP	Neighborhood
BP	GO:0050776	regulation of immune response	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051641	cellular localization	IEP	Neighborhood
BP	GO:0051645	Golgi localization	IEP	Neighborhood
BP	GO:0051646	mitochondrion localization	IEP	Neighborhood
BP	GO:0060151	peroxisome localization	IEP	Neighborhood
BP	GO:0072657	protein localization to membrane	IEP	Neighborhood
BP	GO:0080134	regulation of response to stress	IEP	Neighborhood
BP	GO:0080135	regulation of cellular response to stress	IEP	Neighborhood
BP	GO:0090150	establishment of protein localization to membrane	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!

AT1G66140 (ZFP4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation