AT1G66230 (AtMYB20, MYB20)

Aliases : AtMYB20, MYB20

Description : myb domain protein 20

Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000296 (SeedPlants) Phylogenetic Tree(s): OG_06_0000296_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G66230
Cluster	HCCA: Cluster_100

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00261750	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
AMTR_s00024p00224470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
AMTR_s00032p00057800	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
AMTR_s00079p00140660	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
AT1G09540	ATMYB61, MYB61	myb domain protein 61	0.03	Archaeplastida
AT1G69560	LOF2, MYB105, ATMYB105	myb domain protein 105	0.03	Archaeplastida
AT3G01530	MYB57, ATMYB57	myb domain protein 57	0.03	Archaeplastida
AT4G21440	ATMYB102, ATM4, MYB102	MYB-like 102	0.02	Archaeplastida
AT5G17800	MYB56, AtMYB56	myb domain protein 56	0.03	Archaeplastida
AT5G56110	MYB103,...	myb domain protein 103	0.03	Archaeplastida
AT5G62320	ATMYB99, ATMYBCU15, MYB99	myb domain protein 99	0.03	Archaeplastida
GSVIVT01000232001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01004464001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.05	Archaeplastida
GSVIVT01008303001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.04	Archaeplastida
GSVIVT01015102001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.07	Archaeplastida
GSVIVT01018577001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01023531001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.05	Archaeplastida
GSVIVT01025269001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
GSVIVT01028235001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
GSVIVT01035459001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.06	Archaeplastida
Gb_02419	No alias	transcription factor (MYB)	0.03	Archaeplastida
Gb_05115	No alias	transcription factor (MYB)	0.07	Archaeplastida
LOC_Os01g09590.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os01g45090.1	No alias	transcription factor (MYB)	0.05	Archaeplastida
LOC_Os01g65370.1	No alias	transcription factor (MYB)	0.06	Archaeplastida
LOC_Os03g38210.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os04g39470.1	No alias	transcription factor (MYB). transcriptional key...	0.02	Archaeplastida
LOC_Os04g42950.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os04g45060.1	No alias	transcription factor (MYB)	0.05	Archaeplastida
LOC_Os04g50770.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os05g48010.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os05g49310.1	No alias	transcription factor (MYB)	0.05	Archaeplastida
LOC_Os06g02250.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os08g33150.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
LOC_Os10g33810.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_10431212g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_140579g0010	No alias	transcription factor (MYB)	0.04	Archaeplastida
MA_22140g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_2797g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_323706g0010	No alias	transcription factor (MYB)	0.04	Archaeplastida
MA_33964g0010	No alias	transcription factor (MYB)	0.05	Archaeplastida
MA_437179g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
MA_64405g0010	No alias	transcription factor (MYB)	0.04	Archaeplastida
MA_83918g0010	No alias	transcription factor (MYB)	0.03	Archaeplastida
Pp3c1_1650V3.1	No alias	myb domain protein 105	0.05	Archaeplastida
Pp3c25_3170V3.1	No alias	myb domain protein 16	0.03	Archaeplastida
Pp3c7_23450V3.1	No alias	myb domain protein 106	0.02	Archaeplastida
Pp3c9_10290V3.1	No alias	myb domain protein 55	0.03	Archaeplastida
Smo100734	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
Solyc01g010910.2.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc02g067760.4.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc02g091980.2.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc02g093740.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc03g005570.3.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc03g059200.2.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc03g093930.4.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc03g113530.3.1	No alias	transcription factor (MYB)	0.02	Archaeplastida
Solyc03g119370.2.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc05g014290.4.1	No alias	transcription factor (MYB)	0.05	Archaeplastida
Solyc06g074910.3.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc10g005760.3.1	No alias	transcription factor (MYB). transcriptional key...	0.02	Archaeplastida
Solyc10g081490.2.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc12g008670.2.1	No alias	transcription factor (MYB)	0.03	Archaeplastida
Solyc12g099140.2.1	No alias	transcription factor (MYB)	0.05	Archaeplastida
Zm00001e001803_P001	No alias	transcription factor (MYB)	0.04	Archaeplastida
Zm00001e007085_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e010251_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e012497_P001	No alias	transcription factor (MYB)	0.04	Archaeplastida
Zm00001e013910_P001	No alias	transcription factor (MYB)	0.02	Archaeplastida
Zm00001e020140_P001	No alias	transcription factor (MYB)	0.06	Archaeplastida
Zm00001e033519_P001	No alias	transcription factor (MYB)	0.03	Archaeplastida
Zm00001e036684_P002	No alias	transcription factor (MYB)	0.04	Archaeplastida
Zm00001e037956_P001	No alias	transcription factor (MYB)	0.05	Archaeplastida
Zm00001e038356_P001	No alias	transcription factor (MYB)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044087	regulation of cellular component biogenesis	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903338	regulation of cell wall organization or biogenesis	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2000652	regulation of secondary cell wall biogenesis	IMP	Interproscan
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0002682	regulation of immune system process	IEP	Neighborhood
BP	GO:0006595	polyamine metabolic process	IEP	Neighborhood
BP	GO:0006598	polyamine catabolic process	IEP	Neighborhood
BP	GO:0006605	protein targeting	IEP	Neighborhood
BP	GO:0006612	protein targeting to membrane	IEP	Neighborhood
BP	GO:0006886	intracellular protein transport	IEP	Neighborhood
BP	GO:0008104	protein localization	IEP	Neighborhood
MF	GO:0008374	O-acyltransferase activity	IEP	Neighborhood
BP	GO:0009611	response to wounding	IEP	Neighborhood
BP	GO:0009698	phenylpropanoid metabolic process	IEP	Neighborhood
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	Neighborhood
BP	GO:0009804	coumarin metabolic process	IEP	Neighborhood
BP	GO:0009805	coumarin biosynthetic process	IEP	Neighborhood
BP	GO:0009808	lignin metabolic process	IEP	Neighborhood
BP	GO:0009809	lignin biosynthetic process	IEP	Neighborhood
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0009893	positive regulation of metabolic process	IEP	Neighborhood
BP	GO:0009962	regulation of flavonoid biosynthetic process	IEP	Neighborhood
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	IEP	Neighborhood
BP	GO:0010252	auxin homeostasis	IEP	Neighborhood
BP	GO:0010363	regulation of plant-type hypersensitive response	IEP	Neighborhood
BP	GO:0010941	regulation of cell death	IEP	Neighborhood
BP	GO:0015031	protein transport	IEP	Neighborhood
BP	GO:0015833	peptide transport	IEP	Neighborhood
MF	GO:0016207	4-coumarate-CoA ligase activity	IEP	Neighborhood
MF	GO:0016405	CoA-ligase activity	IEP	Neighborhood
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Neighborhood
MF	GO:0016878	acid-thiol ligase activity	IEP	Neighborhood
BP	GO:0019748	secondary metabolic process	IEP	Neighborhood
MF	GO:0030599	pectinesterase activity	IEP	Neighborhood
BP	GO:0031347	regulation of defense response	IEP	Neighborhood
BP	GO:0033036	macromolecule localization	IEP	Neighborhood
BP	GO:0034613	cellular protein localization	IEP	Neighborhood
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0042886	amide transport	IEP	Neighborhood
BP	GO:0043067	regulation of programmed cell death	IEP	Neighborhood
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	Neighborhood
BP	GO:0045088	regulation of innate immune response	IEP	Neighborhood
BP	GO:0045184	establishment of protein localization	IEP	Neighborhood
BP	GO:0046907	intracellular transport	IEP	Neighborhood
MF	GO:0047172	shikimate O-hydroxycinnamoyltransferase activity	IEP	Neighborhood
MF	GO:0047205	quinate O-hydroxycinnamoyltransferase activity	IEP	Neighborhood
BP	GO:0048518	positive regulation of biological process	IEP	Neighborhood
BP	GO:0048583	regulation of response to stimulus	IEP	Neighborhood
MF	GO:0050734	hydroxycinnamoyltransferase activity	IEP	Neighborhood
MF	GO:0050737	O-hydroxycinnamoyltransferase activity	IEP	Neighborhood
BP	GO:0050776	regulation of immune response	IEP	Neighborhood
BP	GO:0051641	cellular localization	IEP	Neighborhood
BP	GO:0051649	establishment of localization in cell	IEP	Neighborhood
BP	GO:0070727	cellular macromolecule localization	IEP	Neighborhood
BP	GO:0071702	organic substance transport	IEP	Neighborhood
BP	GO:0071705	nitrogen compound transport	IEP	Neighborhood
BP	GO:0072657	protein localization to membrane	IEP	Neighborhood
BP	GO:0080134	regulation of response to stress	IEP	Neighborhood
BP	GO:0080135	regulation of cellular response to stress	IEP	Neighborhood
BP	GO:0090150	establishment of protein localization to membrane	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	73	111
IPR001005	SANT/Myb	14	61

External Links

No external refs found!

AT1G66230 (AtMYB20, MYB20)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation