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  5. Cpa|evm.model.tig00000113.111

Cpa|evm.model.tig00000113.111


Description : ATP-dependent RNA helicase DEAH13 OS=Arabidopsis thaliana


Gene families : OG0006300 (Archaeplastida) Phylogenetic Tree(s): OG0006300_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000113.111
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT1G33390 FAS4, ATFAS4 RNA helicase family protein 0.04 Archaeplastida
Cre07.g352251 No alias ATP-dependent RNA helicase DEAH13 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01028054001 No alias ATP-dependent RNA helicase DEAH13 OS=Arabidopsis thaliana 0.02 Archaeplastida
LOC_Os02g50370.1 No alias ATP-dependent RNA helicase DEAH13 OS=Arabidopsis... 0.05 Archaeplastida
Mp4g04560.1 No alias ATP-dependent RNA helicase DEAH13 OS=Arabidopsis... 0.07 Archaeplastida
Pp3c3_18630V3.1 No alias RNA helicase family protein 0.08 Archaeplastida
Zm00001e015757_P002 No alias ATP-dependent RNA helicase DEAH13 OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 915 1014
IPR011545 DEAD/DEAH_box_helicase_dom 333 499
No external refs found!