Cpa|evm.model.tig00000142.3

Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3d component

Gene families : OG0004060 (Archaeplastida) Phylogenetic Tree(s): OG0004060_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00000142.3
Cluster	HCCA: Cluster_131

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00206060	evm_27.TU.AmTr_v1...	Protein biosynthesis.translation...	0.03	Archaeplastida
AT4G20980	No alias	Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)	0.02	Archaeplastida
AT5G44320	No alias	Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)	0.03	Archaeplastida
Cre05.g242300	No alias	Protein biosynthesis.translation...	0.1	Archaeplastida
GSVIVT01002790001	No alias	Protein biosynthesis.translation...	0.03	Archaeplastida
Mp4g09070.1	No alias	component eIF3d of eIF3 mRNA-to-PIC binding complex	0.06	Archaeplastida
Pp3c13_8400V3.1	No alias	Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)	0.04	Archaeplastida
Pp3c3_3440V3.1	No alias	Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)	0.03	Archaeplastida
Solyc02g078120.2.1	No alias	component eIF3d of eIF3 mRNA-to-PIC binding complex	0.05	Archaeplastida
Zm00001e032448_P001	No alias	component eIF3d of eIF3 mRNA-to-PIC binding complex	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003743	translation initiation factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	Interproscan
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEA	Interproscan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007783	eIF3d	253	488
IPR007783	eIF3d	5	236

External Links

No external refs found!