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  5. Cpa|evm.model.tig00000144.152

Cpa|evm.model.tig00000144.152


Description : Coatomer subunit alpha-3 OS=Oryza sativa subsp. japonica


Gene families : OG0002801 (Archaeplastida) Phylogenetic Tree(s): OG0002801_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000144.152
Cluster HCCA: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00220200 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 Archaeplastida
AT1G62020 No alias Coatomer, alpha subunit 0.05 Archaeplastida
AT2G21390 No alias Coatomer, alpha subunit 0.05 Archaeplastida
Cre13.g565850 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 Archaeplastida
GSVIVT01009813001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.06 Archaeplastida
Gb_09624 No alias subunit alpha of coat protein complex 0.07 Archaeplastida
Gb_15817 No alias subunit alpha of coat protein complex 0.02 Archaeplastida
LOC_Os03g50340.1 No alias subunit alpha of coat protein complex 0.01 Archaeplastida
LOC_Os03g50350.1 No alias subunit alpha of coat protein complex 0.03 Archaeplastida
MA_10428405g0010 No alias subunit alpha of coat protein complex 0.02 Archaeplastida
MA_10429054g0020 No alias subunit alpha of coat protein complex 0.02 Archaeplastida
MA_10429054g0030 No alias Coatomer subunit alpha-1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp3g00050.1 No alias subunit alpha of coat protein complex 0.04 Archaeplastida
Pp3c11_12600V3.1 No alias Coatomer, alpha subunit 0.02 Archaeplastida
Pp3c1_12990V3.1 No alias Coatomer, alpha subunit 0.05 Archaeplastida
Pp3c2_24120V3.1 No alias Coatomer, alpha subunit 0.03 Archaeplastida
Smo77651 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 Archaeplastida
Smo85610 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
Solyc04g080980.2.1 No alias subunit alpha of coat protein complex 0.03 Archaeplastida
Solyc07g032100.3.1 No alias subunit alpha of coat protein complex 0.03 Archaeplastida
Zm00001e005441_P001 No alias subunit alpha of coat protein complex 0.03 Archaeplastida
Zm00001e012192_P001 No alias subunit alpha of coat protein complex 0.03 Archaeplastida
Zm00001e016505_P002 No alias subunit alpha of coat protein complex 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006692 Coatomer_WD-assoc_reg 509 699
IPR001680 WD40_repeat 10 37
IPR001680 WD40_repeat 126 158
IPR001680 WD40_repeat 44 79
IPR001680 WD40_repeat 84 121
IPR001680 WD40_repeat 177 210
No external refs found!