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  5. Cpa|evm.model.tig00000215.115

Cpa|evm.model.tig00000215.115


Description : Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.RAE1 scaffold nucleoporin


Gene families : OG0003816 (Archaeplastida) Phylogenetic Tree(s): OG0003816_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000215.115
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
LOC_Os08g07960.1 No alias RAE1 scaffold nucleoporin of nuclear pore complex 0.01 Archaeplastida
MA_27152g0010 No alias Protein RAE1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp5g18210.1 No alias RAE1 scaffold nucleoporin of nuclear pore complex 0.02 Archaeplastida
Pp3c18_21020V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 66 95
IPR001680 WD40_repeat 21 46
IPR001680 WD40_repeat 234 271
IPR001680 WD40_repeat 108 139
No external refs found!