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  5. AT1G67856

AT1G67856


Description : RING/U-box superfamily protein


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000175 (LandPlants) Phylogenetic Tree(s): OG_05_0000175_tree ,
OG_06_0000116 (SeedPlants) Phylogenetic Tree(s): OG_06_0000116_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G67856

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00271850 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00008p00200880 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00018p00191870 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00021p00161170 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
AMTR_s00102p00069840 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00152p00054630 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT1G49200 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT1G49210 No alias RING/U-box superfamily protein 0.1 Archaeplastida
AT2G17730 NIP2 NEP-interacting protein 2 0.02 Archaeplastida
AT2G37580 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT2G42360 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G44578 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G60966 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G00305 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT4G10160 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT4G24015 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT4G38140 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT5G27420 ATL31, CNI1 carbon/nitrogen insensitive 1 0.02 Archaeplastida
AT5G42200 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT5G66070 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Cpa|evm.model.tig00020943.22 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Cre01.g009101 No alias No description available 0.04 Archaeplastida
Cre01.g051700 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
GSVIVT01000538001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.09 Archaeplastida
GSVIVT01009098001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
GSVIVT01012015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01012018001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01012020001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01012022001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01016564001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01018343001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01026703001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01026978001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01037651001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Gb_02533 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_04301 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_04642 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Gb_14775 No alias RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Gb_14777 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_14788 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_15836 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_20461 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Gb_23076 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Gb_35824 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_41385 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os01g11480.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os01g11500.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os01g53500.1 No alias RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.08 Archaeplastida
LOC_Os01g55110.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os01g60730.2 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g15110.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g35329.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os02g35347.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os02g35365.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os02g36300.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g36330.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g37450.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os02g43120.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g45710.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os02g45780.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os02g46100.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g46340.1 No alias E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g57460.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os03g05570.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os03g28080.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os03g44636.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os04g16970.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g49160.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g49550.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os04g49700.1 No alias E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os05g15170.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os05g39260.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g45060.1 No alias RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.09 Archaeplastida
LOC_Os06g08820.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os06g09310.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os06g11450.1 No alias RING-H2-class E3 ligase 0.08 Archaeplastida
LOC_Os06g34560.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g34650.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os06g45580.1 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os07g34180.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g06090.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g38460.1 No alias ubiquitin protein ligase (XERICO) 0.02 Archaeplastida
LOC_Os08g43670.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os09g30160.1 No alias ubiquitin protein ligase (XERICO) 0.02 Archaeplastida
LOC_Os09g36500.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os12g02220.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os12g40460.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_10106144g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_10429091g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_10435495g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_10436650g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_12363g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_15116g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_159453g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_17390g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_181940g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_214717g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_229590g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_25345g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_26001g0020 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_308999g0020 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_31736g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_462422g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_465316g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_5319g0010 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
MA_569551g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_63503g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_6931619g0010 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
MA_7553g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_80729g0030 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_8338g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_85088g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_904294g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Mp5g08270.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Pp3c1_32230V3.1 No alias RING/U-box superfamily protein 0.05 Archaeplastida
Pp3c1_9560V3.1 No alias TOXICOS EN LEVADURA 2 0.04 Archaeplastida
Pp3c20_11600V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c22_15440V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c23_10580V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c23_1651V3.1 No alias RING/U-box superfamily protein 0.05 Archaeplastida
Pp3c26_11650V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c4_30240V3.1 No alias TOXICOS EN LEVADURA 2 0.01 Archaeplastida
Smo96681 No alias Protein degradation.peptide tagging.Ubiquitin... 0.11 Archaeplastida
Solyc01g006910.4.1 No alias RING-H2-class E3 ligase 0.09 Archaeplastida
Solyc01g066430.3.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc01g095810.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc01g105620.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc01g109200.4.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc03g112340.1.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Solyc03g114190.1.1 No alias RING-H2 finger protein ATL56 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc03g123680.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc04g074820.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc05g010175.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc06g053640.1.1 No alias RING-H2-class E3 ligase 0.08 Archaeplastida
Solyc09g075320.1.1 No alias RING-H2-class E3 ligase 0.1 Archaeplastida
Solyc10g009487.1.1 No alias RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc10g081790.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc11g007530.2.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc11g066510.3.1 No alias RING-H2-class E3 ligase 0.08 Archaeplastida
Solyc12g055710.1.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Zm00001e003126_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e003426_P001 No alias ubiquitin protein ligase (XERICO) 0.03 Archaeplastida
Zm00001e007956_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e009988_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e010029_P001 No alias ubiquitin protein ligase (XERICO) 0.02 Archaeplastida
Zm00001e010787_P001 No alias RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e013412_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e013809_P001 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e014709_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e014764_P001 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e015470_P001 No alias RING-H2-class E3 ligase 0.08 Archaeplastida
Zm00001e015805_P001 No alias NEP1-interacting protein-like 2 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e015905_P001 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Zm00001e016474_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e017509_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e017960_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e018028_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e019779_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e021729_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e022742_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e023234_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e023723_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e023908_P006 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e024702_P002 No alias NEP1-interacting protein-like 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e026193_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e026906_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e029032_P001 No alias RING-H2-class E3 ligase 0.11 Archaeplastida
Zm00001e030102_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e031874_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e032186_P001 No alias no hits & (original description: none) 0.09 Archaeplastida
Zm00001e034421_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e036691_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e041385_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e041409_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009611 response to wounding IEP Neighborhood
BP GO:0009612 response to mechanical stimulus IEP Neighborhood
BP GO:0009620 response to fungus IEP Neighborhood
BP GO:0009692 ethylene metabolic process IEP Neighborhood
BP GO:0009693 ethylene biosynthetic process IEP Neighborhood
BP GO:0009694 jasmonic acid metabolic process IEP Neighborhood
BP GO:0009695 jasmonic acid biosynthetic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009723 response to ethylene IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009738 abscisic acid-activated signaling pathway IEP Neighborhood
BP GO:0009751 response to salicylic acid IEP Neighborhood
BP GO:0009753 response to jasmonic acid IEP Neighborhood
BP GO:0009755 hormone-mediated signaling pathway IEP Neighborhood
BP GO:0009873 ethylene-activated signaling pathway IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010200 response to chitin IEP Neighborhood
BP GO:0010243 response to organonitrogen compound IEP Neighborhood
BP GO:0010286 heat acclimation IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
BP GO:0014070 response to organic cyclic compound IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
BP GO:0042446 hormone biosynthetic process IEP Neighborhood
BP GO:0042493 response to drug IEP Neighborhood
BP GO:0043207 response to external biotic stimulus IEP Neighborhood
BP GO:0043449 cellular alkene metabolic process IEP Neighborhood
BP GO:0043450 alkene biosynthetic process IEP Neighborhood
BP GO:0046677 response to antibiotic IEP Neighborhood
MF GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity IEP Neighborhood
BP GO:0048527 lateral root development IEP Neighborhood
BP GO:0048528 post-embryonic root development IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
BP GO:0051707 response to other organism IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0090696 post-embryonic plant organ development IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1900673 olefin metabolic process IEP Neighborhood
BP GO:1900674 olefin biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 86 130
No external refs found!