Cpa|evm.model.tig00000441.12

Description : DEAD-box ATP-dependent RNA helicase 27 OS=Arabidopsis thaliana

Gene families : OG0000482 (Archaeplastida) Phylogenetic Tree(s): OG0000482_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cpa\|evm.model.tig00000441.12
Cluster	HCCA: Cluster_96

Target	Alias	Description	ECC score	Gene Family Method
AT5G54910	No alias	DEA(D/H)-box RNA helicase family protein	0.02	Archaeplastida
Cpa\|evm.model.tig00000441.11	No alias	DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa...	0.05	Archaeplastida
Cre03.g156150	No alias	DEAD-box ATP-dependent RNA helicase 32 OS=Arabidopsis thaliana	0.01	Archaeplastida
Cre07.g314900	No alias	DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa...	0.01	Archaeplastida
GSVIVT01015034001	No alias	DEAD-box ATP-dependent RNA helicase 17 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01032750001	No alias	DEAD-box ATP-dependent RNA helicase 18 OS=Arabidopsis thaliana	0.01	Archaeplastida
Gb_12810	No alias	DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa...	0.01	Archaeplastida
LOC_Os07g33340.1	No alias	DEAD-box ATP-dependent RNA helicase 32 OS=Oryza sativa...	0.02	Archaeplastida
Mp5g04780.1	No alias	DEAD-box ATP-dependent RNA helicase 18 OS=Arabidopsis...	0.01	Archaeplastida
Mp8g10290.1	No alias	DEAD-box ATP-dependent RNA helicase 32 OS=Arabidopsis...	0.01	Archaeplastida
Solyc02g078880.4.1	No alias	DEAD-box ATP-dependent RNA helicase 18 OS=Arabidopsis...	0.01	Archaeplastida
Zm00001e011842_P001	No alias	DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa...	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	220	319

External Links

No external refs found!