Coexpression cluster: Cluster_96 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003824 catalytic activity 32.08% (17/53) 1.67 1e-05 0.000765
GO:0009072 aromatic amino acid family metabolic process 5.66% (3/53) 6.36 6e-06 0.000987
GO:0003674 molecular_function 41.51% (22/53) 0.98 0.000617 0.01963
GO:0016763 transferase activity, transferring pentosyl groups 3.77% (2/53) 5.62 0.000755 0.019995
GO:0016838 carbon-oxygen lyase activity, acting on phosphates 1.89% (1/53) 8.86 0.002146 0.021322
GO:0004590 orotidine-5'-phosphate decarboxylase activity 1.89% (1/53) 8.86 0.002146 0.021322
GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity 1.89% (1/53) 8.86 0.002146 0.021322
GO:0004107 chorismate synthase activity 1.89% (1/53) 8.86 0.002146 0.021322
GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process 1.89% (1/53) 8.86 0.002146 0.021322
GO:0004834 tryptophan synthase activity 1.89% (1/53) 8.86 0.002146 0.021322
GO:0006206 pyrimidine nucleobase metabolic process 1.89% (1/53) 8.86 0.002146 0.021322
GO:0019856 pyrimidine nucleobase biosynthetic process 1.89% (1/53) 8.86 0.002146 0.021322
GO:0009073 aromatic amino acid family biosynthetic process 3.77% (2/53) 6.06 0.000404 0.021428
GO:1901605 alpha-amino acid metabolic process 3.77% (2/53) 4.78 0.002425 0.02268
GO:0008652 cellular amino acid biosynthetic process 3.77% (2/53) 4.74 0.002568 0.022687
GO:1901360 organic cyclic compound metabolic process 11.32% (6/53) 1.96 0.004304 0.022812
GO:0019752 carboxylic acid metabolic process 5.66% (3/53) 3.43 0.002753 0.023041
GO:0006082 organic acid metabolic process 5.66% (3/53) 3.37 0.003063 0.023191
GO:0043436 oxoacid metabolic process 5.66% (3/53) 3.39 0.002937 0.023347
GO:0006568 tryptophan metabolic process 1.89% (1/53) 7.86 0.004287 0.023503
GO:0006586 indolalkylamine metabolic process 1.89% (1/53) 7.86 0.004287 0.023503
GO:0003879 ATP phosphoribosyltransferase activity 1.89% (1/53) 7.86 0.004287 0.023503
GO:0046112 nucleobase biosynthetic process 1.89% (1/53) 7.86 0.004287 0.023503
GO:0042430 indole-containing compound metabolic process 1.89% (1/53) 7.86 0.004287 0.023503
GO:0009112 nucleobase metabolic process 1.89% (1/53) 7.86 0.004287 0.023503
GO:0016835 carbon-oxygen lyase activity 3.77% (2/53) 5.78 0.000602 0.023919
GO:0016829 lyase activity 5.66% (3/53) 3.15 0.004676 0.023982
GO:0006520 cellular amino acid metabolic process 5.66% (3/53) 3.91 0.001056 0.023986
GO:0031390 Ctf18 RFC-like complex 1.89% (1/53) 7.28 0.006423 0.026876
GO:0007064 mitotic sister chromatid cohesion 1.89% (1/53) 7.28 0.006423 0.026876
GO:0007062 sister chromatid cohesion 1.89% (1/53) 7.28 0.006423 0.026876
GO:0009308 amine metabolic process 1.89% (1/53) 7.28 0.006423 0.026876
GO:0044106 cellular amine metabolic process 1.89% (1/53) 7.28 0.006423 0.026876
GO:0006576 cellular biogenic amine metabolic process 1.89% (1/53) 7.28 0.006423 0.026876
GO:0044281 small molecule metabolic process 7.55% (4/53) 2.49 0.005591 0.027783
GO:0008152 metabolic process 20.75% (11/53) 1.3 0.004036 0.0279
GO:0006725 cellular aromatic compound metabolic process 11.32% (6/53) 1.98 0.004021 0.029064
GO:0019239 deaminase activity 1.89% (1/53) 6.86 0.008555 0.032388
GO:0004045 aminoacyl-tRNA hydrolase activity 1.89% (1/53) 6.86 0.008555 0.032388
GO:0009451 RNA modification 3.77% (2/53) 5.06 0.001647 0.032742
GO:0046394 carboxylic acid biosynthetic process 3.77% (2/53) 3.86 0.008364 0.033245
GO:0016053 organic acid biosynthetic process 3.77% (2/53) 3.86 0.008364 0.033245
GO:1903047 mitotic cell cycle process 1.89% (1/53) 6.54 0.010683 0.039502
GO:1901566 organonitrogen compound biosynthetic process 5.66% (3/53) 2.69 0.011344 0.040084
GO:0016853 isomerase activity 3.77% (2/53) 3.64 0.011341 0.040982
GO:0016757 transferase activity, transferring glycosyl groups 3.77% (2/53) 3.54 0.012827 0.044336
GO:0052803 imidazole-containing compound metabolic process 1.89% (1/53) 6.06 0.014925 0.04746
GO:0022402 cell cycle process 1.89% (1/53) 6.06 0.014925 0.04746
GO:0006547 histidine metabolic process 1.89% (1/53) 6.06 0.014925 0.04746
GO:0000105 histidine biosynthetic process 1.89% (1/53) 6.06 0.014925 0.04746
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_91 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_214 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_235 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_262 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_132 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_150 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_154 0.028 Archaeplastida Compare
Gingko biloba HCCA Cluster_151 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_70 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_232 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_175 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_191 0.031 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_282 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_194 0.028 Archaeplastida Compare
Vitis vinifera HCCA Cluster_83 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_155 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_201 0.028 Archaeplastida Compare
Sequences (53) (download table)

InterPro Domains

GO Terms

Family Terms