AT1G70370 (PG2)


Aliases : PG2

Description : polygalacturonase 2


Gene families : OG0000327 (Archaeplastida) Phylogenetic Tree(s): OG0000327_tree ,
OG_05_0000147 (LandPlants) Phylogenetic Tree(s): OG_05_0000147_tree ,
OG_06_0001066 (SeedPlants) Phylogenetic Tree(s): OG_06_0001066_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G70370
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00082380 evm_27.TU.AmTr_v1... BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00059p00084450 evm_27.TU.AmTr_v1... BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00059p00088650 evm_27.TU.AmTr_v1... BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AMTR_s00059p00097920 evm_27.TU.AmTr_v1... BURP domain protein RD22 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00087p00099700 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00109p00021460 evm_27.TU.AmTr_v1... BURP domain protein RD22 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT1G23760 JP630, PG3 BURP domain-containing protein 0.05 Archaeplastida
AT1G60390 PG1 polygalacturonase 1 0.05 Archaeplastida
AT5G25610 ATRD22, RD22 BURP domain-containing protein 0.05 Archaeplastida
GSVIVT01035686001 No alias BURP domain protein RD22 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01035702001 No alias BURP domain protein RD22 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_01410 No alias non-catalytic polygalacturonase regulator 0.03 Archaeplastida
Gb_39304 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.05 Archaeplastida
LOC_Os01g53240.1 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os05g12400.1 No alias BURP domain-containing protein 1 OS=Oryza sativa subsp.... 0.05 Archaeplastida
LOC_Os05g13490.1 No alias BURP domain-containing protein 8 OS=Oryza sativa subsp.... 0.02 Archaeplastida
LOC_Os06g13240.1 No alias BURP domain-containing protein 9 OS=Oryza sativa subsp.... 0.04 Archaeplastida
LOC_Os06g19740.1 No alias no hits & (original description: none) 0.07 Archaeplastida
LOC_Os08g29200.1 No alias non-catalytic polygalacturonase regulator 0.05 Archaeplastida
LOC_Os08g38810.1 No alias BURP domain-containing protein 13 OS=Oryza sativa subsp.... 0.06 Archaeplastida
LOC_Os09g16010.1 No alias non-catalytic polygalacturonase regulator 0.03 Archaeplastida
LOC_Os11g06980.1 No alias BURP domain-containing protein 17 OS=Oryza sativa subsp.... 0.03 Archaeplastida
MA_10428132g0010 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.05 Archaeplastida
MA_183840g0010 No alias BURP domain protein RD22 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_185772g0010 No alias BURP domain protein RD22 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_196669g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_2153472g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_462957g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_577011g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_5913418g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_608446g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_63321g0010 No alias BURP domain protein RD22 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_7645347g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_8888577g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c12_6690V3.1 No alias polygalacturonase 1 0.02 Archaeplastida
Pp3c3_19890V3.1 No alias polygalacturonase 2 0.02 Archaeplastida
Pp3c4_21630V3.1 No alias polygalacturonase 1 0.03 Archaeplastida
Solyc01g109470.3.1 No alias BURP domain protein USPL1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc01g109500.4.1 No alias BURP domain protein USPL1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc02g062300.3.1 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Solyc05g005550.4.1 No alias non-catalytic polygalacturonase regulator 0.02 Archaeplastida
Solyc05g015300.4.1 No alias BURP domain protein RD22 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc08g068130.1.1 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.06 Archaeplastida
Solyc08g068140.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e003182_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e003438_P003 No alias Protein RAFTIN 1A OS=Triticum aestivum... 0.04 Archaeplastida
Zm00001e003891_P006 No alias BURP domain-containing protein 11 OS=Oryza sativa subsp.... 0.06 Archaeplastida
Zm00001e019897_P001 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Zm00001e029096_P002 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.05 Archaeplastida
Zm00001e033843_P001 No alias non-catalytic polygalacturonase regulator 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process RCA Interproscan
BP GO:0000272 polysaccharide catabolic process RCA Interproscan
MF GO:0004650 polygalacturonase activity ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0005982 starch metabolic process RCA Interproscan
BP GO:0007389 pattern specification process RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0008361 regulation of cell size RCA Interproscan
BP GO:0009664 plant-type cell wall organization RCA Interproscan
BP GO:0009825 multidimensional cell growth RCA Interproscan
BP GO:0009832 plant-type cell wall biogenesis RCA Interproscan
BP GO:0009926 auxin polar transport RCA Interproscan
BP GO:0009932 cell tip growth RCA Interproscan
BP GO:0010015 root morphogenesis RCA Interproscan
BP GO:0010075 regulation of meristem growth RCA Interproscan
BP GO:0010817 regulation of hormone levels RCA Interproscan
BP GO:0040007 growth RCA Interproscan
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light RCA Interproscan
BP GO:0048653 anther development RCA Interproscan
BP GO:0048767 root hair elongation RCA Interproscan
BP GO:0071555 cell wall organization RCA Interproscan
Type GO Term Name Evidence Source
MF GO:0003883 CTP synthase activity IEP Neighborhood
MF GO:0004028 3-chloroallyl aldehyde dehydrogenase activity IEP Neighborhood
MF GO:0004029 aldehyde dehydrogenase (NAD) activity IEP Neighborhood
MF GO:0004165 dodecenoyl-CoA delta-isomerase activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004452 isopentenyl-diphosphate delta-isomerase activity IEP Neighborhood
MF GO:0004560 alpha-L-fucosidase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005496 steroid binding IEP Neighborhood
CC GO:0005615 extracellular space IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0007020 microtubule nucleation IEP Neighborhood
MF GO:0008142 oxysterol binding IEP Neighborhood
MF GO:0008195 phosphatidate phosphatase activity IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0008809 carnitine racemase activity IEP Neighborhood
CC GO:0009505 plant-type cell wall IEP Neighborhood
BP GO:0009806 lignan metabolic process IEP Neighborhood
BP GO:0009807 lignan biosynthetic process IEP Neighborhood
BP GO:0009835 fruit ripening IEP Neighborhood
BP GO:0009856 pollination IEP Neighborhood
BP GO:0010082 regulation of root meristem growth IEP Neighborhood
BP GO:0010115 regulation of abscisic acid biosynthetic process IEP Neighborhood
BP GO:0010143 cutin biosynthetic process IEP Neighborhood
BP GO:0010315 auxin efflux IEP Neighborhood
BP GO:0010337 regulation of salicylic acid metabolic process IEP Neighborhood
BP GO:0010422 regulation of brassinosteroid biosynthetic process IEP Neighborhood
BP GO:0010541 acropetal auxin transport IEP Neighborhood
BP GO:0010565 regulation of cellular ketone metabolic process IEP Neighborhood
BP GO:0010893 positive regulation of steroid biosynthetic process IEP Neighborhood
BP GO:0010942 positive regulation of cell death IEP Neighborhood
MF GO:0015928 fucosidase activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0018685 alkane 1-monooxygenase activity IEP Neighborhood
BP GO:0018904 ether metabolic process IEP Neighborhood
BP GO:0019216 regulation of lipid metabolic process IEP Neighborhood
BP GO:0019217 regulation of fatty acid metabolic process IEP Neighborhood
BP GO:0019218 regulation of steroid metabolic process IEP Neighborhood
BP GO:0019747 regulation of isoprenoid metabolic process IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0031540 regulation of anthocyanin biosynthetic process IEP Neighborhood
MF GO:0031559 oxidosqualene cyclase activity IEP Neighborhood
BP GO:0032350 regulation of hormone metabolic process IEP Neighborhood
BP GO:0032352 positive regulation of hormone metabolic process IEP Neighborhood
MF GO:0032934 sterol binding IEP Neighborhood
MF GO:0042299 lupeol synthase activity IEP Neighborhood
MF GO:0042300 beta-amyrin synthase activity IEP Neighborhood
BP GO:0042304 regulation of fatty acid biosynthetic process IEP Neighborhood
MF GO:0042349 guiding stereospecific synthesis activity IEP Neighborhood
BP GO:0045834 positive regulation of lipid metabolic process IEP Neighborhood
BP GO:0045940 positive regulation of steroid metabolic process IEP Neighborhood
BP GO:0046885 regulation of hormone biosynthetic process IEP Neighborhood
BP GO:0046886 positive regulation of hormone biosynthetic process IEP Neighborhood
BP GO:0046889 positive regulation of lipid biosynthetic process IEP Neighborhood
BP GO:0046890 regulation of lipid biosynthetic process IEP Neighborhood
BP GO:0048437 floral organ development IEP Neighborhood
BP GO:0048441 petal development IEP Neighborhood
BP GO:0048443 stamen development IEP Neighborhood
BP GO:0050810 regulation of steroid biosynthetic process IEP Neighborhood
BP GO:0062012 regulation of small molecule metabolic process IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
BP GO:0080140 regulation of jasmonic acid metabolic process IEP Neighborhood
BP GO:0080141 regulation of jasmonic acid biosynthetic process IEP Neighborhood
BP GO:0080142 regulation of salicylic acid biosynthetic process IEP Neighborhood
BP GO:0090030 regulation of steroid hormone biosynthetic process IEP Neighborhood
MF GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity IEP Neighborhood
BP GO:1901503 ether biosynthetic process IEP Neighborhood
BP GO:1901598 (-)-pinoresinol metabolic process IEP Neighborhood
BP GO:1901599 (-)-pinoresinol biosynthetic process IEP Neighborhood
BP GO:1902446 regulation of shade avoidance IEP Neighborhood
BP GO:1902448 positive regulation of shade avoidance IEP Neighborhood
BP GO:1902930 regulation of alcohol biosynthetic process IEP Neighborhood
BP GO:2000488 positive regulation of brassinosteroid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004873 BURP_dom 411 623
No external refs found!